Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_1626 |
Symbol | |
ID | 5375880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | + |
Start bp | 1828129 |
End bp | 1829748 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640843135 |
Product | oxidoreductase |
Protein accession | YP_001378814 |
Protein GI | 153004489 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.498473 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.638708 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGGAGC GGAGCGGAGA CGAGCGGGCG GGCCTGAGCG GCGAGGAGGT GGCGATCGCG CTCCGCGTGC TCGCCCGCGT CGCGGCGGAC CGGACGGTGC TCGCGGGCGT GGACGCAGAG ACCCGGACGA CGCTCCAGAA GCTCGCCGGC GAGGTGGCCC GGCCCGATCT CAAGCAGCGC AAGAAGCTCC AGCGGGCCCT CCTCCGCGAC GAGCGCGTGC AGCGCAGGGC GCGCGACGAG GCCCTTCGCA AGGAGACGGG CATCCAGCAG CTCCGCGAGG CGCCGGTGTT CTCGACCCCG CTGCCCGAGC TGCCCCGCCC CGGGGCAGAT GCGTCCGGCT GGTGGCCGCG GCTCGGCGAC GGCAGGGCCG CGCCGCCCCC GCCCGACGGC GCCGCGGCCG GAGCGGAGCC CGCGGACGGG CCGGTCCTCT CCGAGCCTCG CAAGTGCTAC GTCTGCAAGG CGCCGTACGA CCGGCTCCAC CGCTTCTACG ATCAGCTGTG CCGCGCCTGC GGCGACGAGA ACTACGCACG CCGAGCGGCG GCCGTGGACC TCCGCGGGCG CGTCGCCCTG GTCACCGGCG CGCGGGTGAA GATCGGCTAC CAGGCCGCGA TCCTGCTGCT GAGGGCGGGG TGCACCGTCG TCGCCTGCAC GCGCTTCCCG CGCGACGCGG CCGCGCGCTA CGCCCGCGAG CCCGACTTCG ACGCGTGGAA GGATCGCCTC CGGATCCACG GCATCGACCT GCGCCACACC CCCAGCGTCG AGCTGCTCGC GCAGCGGCTG GCGGCGACGC TCCCGAGGCT CGACTTCCAG ATCCACAACG CCTGCCAGAC CGTGCGGCGG CCCCCGGGGT TCTACGCCCA CCTGCTCGAG CGGGAGGAGG CCCCGCTCTC CGCGCTGCCC GAGGGGGAGC GCGCGCTCGT GCGCGAGCAC GAGGAGCTCA AGGCGGCGCT GGCCGACCAC CGGACCGCGG CGGGCGTCAC GCGCGCGGCG CTCCTCTCCC AGGCGACGAG CGAGGCGGAC CTGCTCCTCC CCGGCAGGAG CGCGCTGGAG CTGTTCCCGC GCGGCGTGCT CGACGCGGAC CTCCAGCAGG TGGATCTCCG CGCGCACAAC TCGTGGCGGC TCGCGCTGCA CGAGGTGCCG ACGCTGGAGC TGCTCGAGGT GCTCCTCGTG AACGCGACCG CGCCGTTCGT CATGACGGCG CGCCTCAAGC CCCTCATGCT CCGCGATCCC ACCCCCCCGC CCGGCACCGG CACGAGCGGC GACCCCGCGA AGCACGTCGT GCTGGTCTCC GCCATGGAGG GGCAGTTCTA CCGGGAGCAC AAGACCGACA AGCACCCGCA CACGAACATG GCGAAGGCGG CCCTGAACAT GATCGTGCGG ACGAGCGCGA GCGACTACGC GCGCGACGGG ATCCACCTCA ACGCGGTGGA CACGGGCTGG GTCACGGACG AGGACCCGGC CCACCTCGCC GCGCGGAAGG CCGAGGAGCA CGCCTTCTCG CCGCCGCTCG ACGTGGTGGA CGGCGCGGCG CGGATCGTCG CGCCGATCTT CGAAGGGTTC CGCTCCGGCC GCCACCCGGC GGGCCTGTTC TTCAAGGACT ACCGCCCGAC GCCCTGGTGA
|
Protein sequence | MSERSGDERA GLSGEEVAIA LRVLARVAAD RTVLAGVDAE TRTTLQKLAG EVARPDLKQR KKLQRALLRD ERVQRRARDE ALRKETGIQQ LREAPVFSTP LPELPRPGAD ASGWWPRLGD GRAAPPPPDG AAAGAEPADG PVLSEPRKCY VCKAPYDRLH RFYDQLCRAC GDENYARRAA AVDLRGRVAL VTGARVKIGY QAAILLLRAG CTVVACTRFP RDAAARYARE PDFDAWKDRL RIHGIDLRHT PSVELLAQRL AATLPRLDFQ IHNACQTVRR PPGFYAHLLE REEAPLSALP EGERALVREH EELKAALADH RTAAGVTRAA LLSQATSEAD LLLPGRSALE LFPRGVLDAD LQQVDLRAHN SWRLALHEVP TLELLEVLLV NATAPFVMTA RLKPLMLRDP TPPPGTGTSG DPAKHVVLVS AMEGQFYREH KTDKHPHTNM AKAALNMIVR TSASDYARDG IHLNAVDTGW VTDEDPAHLA ARKAEEHAFS PPLDVVDGAA RIVAPIFEGF RSGRHPAGLF FKDYRPTPW
|
| |