| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_0734 |
|---|
| Symbol | rho |
|---|
| ID | 5376278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 833246 |
|---|
| End bp | 834559 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640842244 |
|---|
| Product | transcription termination factor Rho |
|---|
| Protein accession | YP_001377931 |
|---|
| Protein GI | 153003606 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1158] Transcription termination factor |
|---|
| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCG CCGCTCAGCC CGCCGCGCCC ACCCCGTCGA GCCTCACGGA CCTGAAGCAC
ATGAAGGTCG CGGAGCTCGC CAAGCTCGCC CGCAGCCTGG AGATCGAGGC CGCCGGGGCG
ATGAAGAAGC AGGACCTCAT CTTCGCGATC CTCCAGGCCC AGTCCAAGGT GGCCGAGGAG
AAGAAGGAGG AGATGGAGGT CGGCGGCGAG GGCACGCTCG AGGTGCTCCC CGACGGCTTC
GGGTTCCTGC GCAGCCCGGA CTTCAGCTAC CTGCCCGGGC CCGACGACAT CTACGTGTCG
CCCTCGCAGA TCCGGCGGTT CAACCTGCGC ACCGGCGACA CCGTGCGCGG GACGGTGCGC
CAGCCGAAGG AGGGCGAGCG GTACTTCGCG CTGCTCAAGG TGGACTCGAT CAACGGCGAG
CCCCCCGAGG AGAACCAGAC GAAGGTCCTC TTCGACAACC TGACGCCGCT CTATCCGACC
GAGCGCCTCT CCCTCGAGCA CGATCCGAAC GAGATGACGA CGCGGGTCGT CGACCTGTTC
TCGCCCATCG GCAAGGGGCA GCGCTGCCTC ATCGTCTCCC CGCCCCGCGC CGGCAAGACG
GTGCTCCTGC AGAACATGGC GCACGCCGTC ACCACCAATC ACCCTGAGTG CACCCTCATC
GTGCTGCTCA TCGACGAGCG GCCCGAGGAG GTGACCGACA TGGAGCGGAC GGTGAAGGGC
GAGGTGGTCG CCTCGACCTT CGACGAGCCC GCCACCCGGC ACGTGCAGGT CGCGGAGATG
GTGATCGAGA AGGCGCGCCG CCTCGTCGAG CACAAGAAGG ACGTGGTGAT CCTGCTCGAC
TCGATCACCC GCCTCGCGCG CGCCTACAAC TCGGTCGTCC CGCCCTCGGG CAAGATCCTC
TCCGGCGGCG TGGACTCGAA CGCGCTCCAC AAGCCGAAGC GCTTCTTCGG CGCCGCCCGC
AACATCGAGG AGGGCGGCTC GCTCACCATC ATCGGCACCG CGCTCGTCGA CACCGGCAGC
CGCATGGACG AGGTGATCTT CGAGGAGTTC AAGGGCACCG GGAACTCCGA GATCGTGCTC
GACCGCAAGA TGATGGAGAA GCGGATCTTC CCGACCATGG ACATCGGCAA GAGCGGCACG
CGCAAGGAGG AGCTGCTGCT CCCGGCGGAC TGGCTCTCGA AGATCTACAT CCTGCGCCAG
ACCATCCTGA ACGGCCTCGA CAACGTGGAG GCCATGAAGT TCATCCTCGA CAAGTTCCGC
CAGGTGAAGA ACCACGAGGA GTTCTTCAAG ATGATGGTGG GGGGCGGCAA GTAG
|
|---|
| Protein sequence | MPAAAQPAAP TPSSLTDLKH MKVAELAKLA RSLEIEAAGA MKKQDLIFAI LQAQSKVAEE
KKEEMEVGGE GTLEVLPDGF GFLRSPDFSY LPGPDDIYVS PSQIRRFNLR TGDTVRGTVR
QPKEGERYFA LLKVDSINGE PPEENQTKVL FDNLTPLYPT ERLSLEHDPN EMTTRVVDLF
SPIGKGQRCL IVSPPRAGKT VLLQNMAHAV TTNHPECTLI VLLIDERPEE VTDMERTVKG
EVVASTFDEP ATRHVQVAEM VIEKARRLVE HKKDVVILLD SITRLARAYN SVVPPSGKIL
SGGVDSNALH KPKRFFGAAR NIEEGGSLTI IGTALVDTGS RMDEVIFEEF KGTGNSEIVL
DRKMMEKRIF PTMDIGKSGT RKEELLLPAD WLSKIYILRQ TILNGLDNVE AMKFILDKFR
QVKNHEEFFK MMVGGGK
|
|---|
| |