Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_0144 |
Symbol | |
ID | 5374480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | - |
Start bp | 173209 |
End bp | 173874 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 640841656 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001377346 |
Protein GI | 153003021 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0402139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.55129 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGCCT CTGTCGCCAT GCGCAAGGCG GGCGCCCCGC GCGCTGGGAT CGCGGAGCGG ATCTGGGACG CGGCGCGCGC CGAGTTCTCG AAGCGCGGCT ACCACGGCGC GCGGGTCCAG GGGATCGCGC GCGGCGCCGC CTGCAACGTG GCGCTCATCT ACCGGCACTG GGCGTCCAAG CGGGCCCTCT ACCTCGACAT CCTGCGCGCC GTGTGGCTCG GCTCCGCGAA CGAGATCGCG CGGCTCGTGC AGTCGGGGCC CGGCGGGGCG GCGGTGGTGG TCGCCGCGTA CCTGGACGCC ATGATGAAGG ACCCGATGGG CGCCCAGATC CTGATCCGCG AGTACCTCGA CGGCGCACCC TTCCTGTCGC AGCTGACCCA GACCGACCCG GCGCTCCTCG AGCCGGTGCG CCGCGCGGCC GCCGCGCTGG CGGCCGGGGA CGCCTCCGAT CTCGACCCGG TCCTCACCGT CGTCACCGTG GGAGGGCTCG CCGCGCTCGT CGCCTCCTCC CGCGAGGCGG CGCGCCCGTT CGTGCAGGAG CCGATCGCGC CGGAGGCGTG GCGCCAGCAC GTGCTGGAGC TCCTCGTGAA CGGCCTCCGG CCCGCGCGCC CTGCCTCCGT CCCCGGGACG CCGGGCGGCA CGCCGAGCAA CGGCGCAGCC GTGTGA
|
Protein sequence | MDASVAMRKA GAPRAGIAER IWDAARAEFS KRGYHGARVQ GIARGAACNV ALIYRHWASK RALYLDILRA VWLGSANEIA RLVQSGPGGA AVVVAAYLDA MMKDPMGAQI LIREYLDGAP FLSQLTQTDP ALLEPVRRAA AALAAGDASD LDPVLTVVTV GGLAALVASS REAARPFVQE PIAPEAWRQH VLELLVNGLR PARPASVPGT PGGTPSNGAA V
|
| |