Gene Anae109_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_0144 
Symbol 
ID5374480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp173209 
End bp173874 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content76% 
IMG OID640841656 
ProductTetR family transcriptional regulator 
Protein accessionYP_001377346 
Protein GI153003021 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0402139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.55129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCT CTGTCGCCAT GCGCAAGGCG GGCGCCCCGC GCGCTGGGAT CGCGGAGCGG 
ATCTGGGACG CGGCGCGCGC CGAGTTCTCG AAGCGCGGCT ACCACGGCGC GCGGGTCCAG
GGGATCGCGC GCGGCGCCGC CTGCAACGTG GCGCTCATCT ACCGGCACTG GGCGTCCAAG
CGGGCCCTCT ACCTCGACAT CCTGCGCGCC GTGTGGCTCG GCTCCGCGAA CGAGATCGCG
CGGCTCGTGC AGTCGGGGCC CGGCGGGGCG GCGGTGGTGG TCGCCGCGTA CCTGGACGCC
ATGATGAAGG ACCCGATGGG CGCCCAGATC CTGATCCGCG AGTACCTCGA CGGCGCACCC
TTCCTGTCGC AGCTGACCCA GACCGACCCG GCGCTCCTCG AGCCGGTGCG CCGCGCGGCC
GCCGCGCTGG CGGCCGGGGA CGCCTCCGAT CTCGACCCGG TCCTCACCGT CGTCACCGTG
GGAGGGCTCG CCGCGCTCGT CGCCTCCTCC CGCGAGGCGG CGCGCCCGTT CGTGCAGGAG
CCGATCGCGC CGGAGGCGTG GCGCCAGCAC GTGCTGGAGC TCCTCGTGAA CGGCCTCCGG
CCCGCGCGCC CTGCCTCCGT CCCCGGGACG CCGGGCGGCA CGCCGAGCAA CGGCGCAGCC
GTGTGA
 
Protein sequence
MDASVAMRKA GAPRAGIAER IWDAARAEFS KRGYHGARVQ GIARGAACNV ALIYRHWASK 
RALYLDILRA VWLGSANEIA RLVQSGPGGA AVVVAAYLDA MMKDPMGAQI LIREYLDGAP
FLSQLTQTDP ALLEPVRRAA AALAAGDASD LDPVLTVVTV GGLAALVASS REAARPFVQE
PIAPEAWRQH VLELLVNGLR PARPASVPGT PGGTPSNGAA V