| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2125 |
|---|
| Symbol | |
|---|
| ID | 6273707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 2590141 |
|---|
| End bp | 2591412 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642614187 |
|---|
| Product | Adenylosuccinate synthase |
|---|
| Protein accession | YP_001878715 |
|---|
| Protein GI | 187736603 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0104] Adenylosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00184] adenylosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.9394 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 0.847855 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACCA TTATTATCGG CTCCCAATGG GGCGACGAAG GCAAGGGCAA AATGATCGAT
TTCCTGACGG AATCCGCCGA CGTGGTGGCA CGCGGCCAGG GCGGCAACAA CGCCGGCCAT
ACTGTAATTG CCAATGGAAA GAAATATATT CTCCACCTGG TTCCCTCCGG CATCCTGTGG
CCGGACAAGC TTTGCGTCAT CGGTAATGGT GTGGTGCTGG ACCCCATCGG CCTGGTGGAG
GAAATCAATG AACTCCGCGG CCAGGGCGTG ACCATTACAA AAGACAACCT TCTTATCTCC
GACCGCGCCC ACGTGGTCCT TCCCTTCCAC AAGGAAATGG ACGCCGCCCA GGAATCCGCC
CTCGGCAAAA AAGCCATCGG CACCACCAAG CGCGGCATCG GCCCCACTTA CGCGGACAAG
GCGCGCCGCA TCGGCGTGCG CATGGCGGAT ATGAGGGATC CCGCGATTTT TGACGAAGTG
CTGCGCCGCC GCATCAGGAT GGCGAATGCG GAAATGGAAC GCATGGGCCT TCCCGCTATG
GATGAAGAAA AAATGGTGGC GGAAGTAAGC GCCGCCGCGG ATGTGCTGCG CCCCCACATC
ACCAACACCA TTCCGGTTAT GCACGAAGCC GTGGCCTCCG GAAAAAGCAT TCTCTTTGAA
GGGGCCCAGG GAGCTTACCT GGATGTGGAC TTCGGCACCT ATCCGTTCGT CACCTCCTCC
AACACCTCTT CCGCTGGCGC CTGCACCGGC ACGGGTGTTC CTCCGCACAA AATTGACCGC
ATCATCGGCG TCTGCAAGGC CTACACCACC CGCGTGGGCG CAGGCCCCTT CGTCACGGAG
GATGAAGACA TCTCCAACCA TCTGCACAGC ATGGGCCGCG AATTCGGCGC CACCACGGGC
CGCCCCCGCC GTTGCGGTTG GGCTGACGGC GTGCTGCTGC GCTTCTCCGC CATGTTCAAC
GGTTTTGATG AAATGGCCAT GACCAACCTG GACGGCTACG ACAAGTGCCC GGAAATTAAA
ATCTGCACGG GTTACGATCT GGACGGGGAA ATCCTGGCTT ATCCGCCCGC CACAGTGGAT
GAATGGGAAC GCTGCAAGCC CGTGTATGAA ACGGTGCCCG GCTGGATGCA GGACATTTCC
TCCTGCCGTT CCTGGGAAGA GATTCCGGAA CAGGCCAAGA AATTCGTCAA ACGCATGAGC
GAGCTCATCG GCTGCCCCGT CACAACCGTG GGCGTAGGCC CCGACCGCGA ACAGACGATT
GCCGTGCAAT AA
|
|---|
| Protein sequence | MNTIIIGSQW GDEGKGKMID FLTESADVVA RGQGGNNAGH TVIANGKKYI LHLVPSGILW
PDKLCVIGNG VVLDPIGLVE EINELRGQGV TITKDNLLIS DRAHVVLPFH KEMDAAQESA
LGKKAIGTTK RGIGPTYADK ARRIGVRMAD MRDPAIFDEV LRRRIRMANA EMERMGLPAM
DEEKMVAEVS AAADVLRPHI TNTIPVMHEA VASGKSILFE GAQGAYLDVD FGTYPFVTSS
NTSSAGACTG TGVPPHKIDR IIGVCKAYTT RVGAGPFVTE DEDISNHLHS MGREFGATTG
RPRRCGWADG VLLRFSAMFN GFDEMAMTNL DGYDKCPEIK ICTGYDLDGE ILAYPPATVD
EWERCKPVYE TVPGWMQDIS SCRSWEEIPE QAKKFVKRMS ELIGCPVTTV GVGPDREQTI
AVQ
|
|---|
| |