Gene Amuc_1891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1891 
Symbol 
ID6275283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2297599 
End bp2298486 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content59% 
IMG OID642613952 
Producthypothetical protein 
Protein accessionYP_001878486 
Protein GI187736374 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTTTT TCCTTGCCGC TTTTCAGGCA AAGGGAAAAT ATAATCCGCC CTGTTTCGTC 
ATCATGAAAG CATACGTTAT CTTAAAAAAC TCACTGCTGG CGGCCGCTAT CGGCTGCGCT
TTGTCCGGCT GCTACGATCC TTATTATGAC AATTTCAGCG TGTCAGGCTC CTACAGCAGC
GGAGGTTCCG GCGTGTCGTA CATGTATGAC AGCTCCGGCT ACCCCATTTA CGGATATTAT
GGAGGAAGAC CCATTTATGC CTACGACACG TTCGGAAGCC CCATTTACTC CATCAACCTG
ATCCGTCCGA ATTACTATAT TCCCACGTGG GGGCCGGCTC CCTATTACCG CGGGCATTAT
GTCCGTCCCC ATAACTGCCG CCCCATGGCA AAACCGCCGA TGAAACCCCA CTTCAGGCCT
GACCATTTCC GTCCGGGAAA CAACAGGCCG GCCCCTCAGC CCGGACGGCC CAATCAACGG
CCGGACTTTG GAAAACCCGG CAATTTACAG CGGCCGCCAG CACATCATCC GGGAATCAAC
CAGCCCGGAC GGCCTTCTCG CCCTTCCGCC AATAATCCTT CCCGTCCCGG CGGCACGAAT
CGCCCCGTCA TCAACCGTCC GGAAGGCAAC CGTCCCTCCA GACCGGATTT CGGACGTCCC
AGCCGCCCTT CCACCCTGCC GTCTTCAAGG CCTTCCGCCC CCAATCCAGG CCACTCCGGC
ATCAACCGCC CCGGCAGGCC CTCTCCCGTT TCCCGGCCTT CTTCCCCGCC CCATTCCGCC
AGCGCACCCA GCAGGCCGTC CTCCCCTCAT TCATCTGCGC CATCCCGTCC ATCCCCTTCA
CCGAAACCCT CCAATCCCGG GAATTCCCAC GGAACGCACA GGAGATAA
 
Protein sequence
MYFFLAAFQA KGKYNPPCFV IMKAYVILKN SLLAAAIGCA LSGCYDPYYD NFSVSGSYSS 
GGSGVSYMYD SSGYPIYGYY GGRPIYAYDT FGSPIYSINL IRPNYYIPTW GPAPYYRGHY
VRPHNCRPMA KPPMKPHFRP DHFRPGNNRP APQPGRPNQR PDFGKPGNLQ RPPAHHPGIN
QPGRPSRPSA NNPSRPGGTN RPVINRPEGN RPSRPDFGRP SRPSTLPSSR PSAPNPGHSG
INRPGRPSPV SRPSSPPHSA SAPSRPSSPH SSAPSRPSPS PKPSNPGNSH GTHRR