| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1833 |
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| Symbol | |
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| ID | 6275729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2227137 |
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| End bp | 2229071 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642613897 |
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| Product | L-fucose transporter |
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| Protein accession | YP_001878432 |
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| Protein GI | 187736320 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | [TIGR00885] L-fucose:H+ symporter permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAACA ACCGTACCTC TACCGTGCCG ATCGTTCCCA AACAGTACCG GCTGCCGTTC
TTCATGCTGG TCTCCTGTTT TGCGCTGTGG GGCCTCCTGA ACAACATGAC GGACAACCTG
GTTCCGGCAT TTAGCAAAAT ATTCATGATC AATGCTTCGG AATCCGCCGG AGTTCAGATT
TCCTTCTATG GGGCCTATGC GGTGCTTGCC ATTTTCGCCT CCATCCTTCT GGAGGAATTT
TCCTATAAGG CGGGTGTCCT CATCGGGCTG GGGCTCTACA TGATCGGCGC GCTGTGCTAC
ATTCCCGCCG CCATCGGGCA AAGTTTCGAT ATCTATCTGA TGGCTATCTT CGTGCTGGCC
GGAGGCCTCT CCATTTTGGA GACCACCTGC AACCCCTTCG TTCTCTCCAT GGGGTCCCAG
GAAACGAGCG TCCGCCGTCT GAACTTCGCC CAGGCCTTCA ATCCCATAGG CTCCCTGACA
GGTATTTTCC TGGCCAAATA TTTCATTCTG GCGCATTTGA ACGATGCGGA CATGGACACC
CGCAAAGCCA TGGACCCGGA ACAACTGAAC GCCATTGTCA GCGATGAACT TTTCTGGGTA
TGCGTTCCTT ATGTGGGCCT GGTAGCCATC GCCGCCGTCA TCTGGTTCTT TTTCTGCCGT
TACAAATCCG ACGATGAAAA CGTACCCACC CGGGAAAACA CACAGCCCCT TTCCTCTAAA
CTCGGCCGCC TGGGACTCTG CATCGCCCTG ATTCTCATCC CCTTCCTGTT CCAGTACTAT
TCCGCTTTCG AATTCAGCAT GGTGCAGCAA ATCCTGATTA TGATGATCGG GCCCATCGCC
TTCCTGCTCA TCATGCCGGA CTACCGCTGC CAGCTTATGA AACTGGTGAA GCTTCCGCGC
TACTTCTGCG GCGTGGCAGC CCAATTTTTC TATGTAGGCG TGCAGATTGC CGTGTGGACG
TGGACGATTA AATACATCAT GTCCGTCTTC CCCGGAATGC AGGAAGCGGC GGCCTCCAAC
TACTATATCT TTTCCATCAT CCTGTTCATC GCCTGCCGCG CCATCACTAC GGCCCTGATG
AAAAAATTTA ACCCGGCCAA CATGATGTCC CTTTTCGCCG TCGCCGGCAT TCTCTGCTGC
CTGGGCACCA TCTATCTGCC CAGGGAAATC TCCGTCTGGA CACTGGTCGG AATCTCCGGC
TGCATGTCCC TGATGTTCCC CACTATTTAC GGCATCGCCC TGCGCGGACT GGGGTCTGAA
GTGAAACTGG GAGCTGCGGG CCTTATCATG GCCATTCTGG GCGGCGCAGT CATTACCCCG
TACATGGGTT CCTGGATAGA CAACACCACA GTAAAAAACC AGGTGGCCTA TTTTGAATCC
ATCAACCGTC CTCTGATCGC GCAGGCGGAA GCTGCGGACG CCCGCAAATC CTTATCCGGA
GCCATGCTGG CGCTGTACAG GATGTCAGAA GCCAGCCCTG CGGACGGAGA AGAACAAGCC
AGGGCCGCCG GCAAATTCCA GAAAAACCTG GAAACCTTCC TTTCCCTCCC CTCCCTGGAA
GGGGACGCTT TTGAGCAGGC GGCCAAATCC CTGCCCGGCT GCTCCTCCCT CAAGCCTGGG
GAACTGGCCG TTTTCAAAGC CAATCTGGAA CGCCTCCCCG CTCCTGCCGG AAGAGAACAG
CAAATTCAGC AATTCTCCCT GATTCCGGCG CTCTCCACGT TATCCGGAAA CCAGGCGGAA
GTGCTGGACA ACCTCATCGC CCTGCCCCTG GACATGAAGC AATTCCAAAC GGCCCAGGAA
AACTTCGTGG AAAAAGCGGT GCGGTCATCC TTCTTTATTC CCATCATCTG CTTTGCCGTG
GTACTAATTT ACGGCTTCTT CTTCCGCAAC ACTCATCTGA AAAAGGAAGA GGAAGAAAAG
CCTGCCCAGG CATGA
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| Protein sequence | MDNNRTSTVP IVPKQYRLPF FMLVSCFALW GLLNNMTDNL VPAFSKIFMI NASESAGVQI
SFYGAYAVLA IFASILLEEF SYKAGVLIGL GLYMIGALCY IPAAIGQSFD IYLMAIFVLA
GGLSILETTC NPFVLSMGSQ ETSVRRLNFA QAFNPIGSLT GIFLAKYFIL AHLNDADMDT
RKAMDPEQLN AIVSDELFWV CVPYVGLVAI AAVIWFFFCR YKSDDENVPT RENTQPLSSK
LGRLGLCIAL ILIPFLFQYY SAFEFSMVQQ ILIMMIGPIA FLLIMPDYRC QLMKLVKLPR
YFCGVAAQFF YVGVQIAVWT WTIKYIMSVF PGMQEAAASN YYIFSIILFI ACRAITTALM
KKFNPANMMS LFAVAGILCC LGTIYLPREI SVWTLVGISG CMSLMFPTIY GIALRGLGSE
VKLGAAGLIM AILGGAVITP YMGSWIDNTT VKNQVAYFES INRPLIAQAE AADARKSLSG
AMLALYRMSE ASPADGEEQA RAAGKFQKNL ETFLSLPSLE GDAFEQAAKS LPGCSSLKPG
ELAVFKANLE RLPAPAGREQ QIQQFSLIPA LSTLSGNQAE VLDNLIALPL DMKQFQTAQE
NFVEKAVRSS FFIPIICFAV VLIYGFFFRN THLKKEEEEK PAQA
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