Gene Amuc_1697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1697 
Symbol 
ID6274633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2062590 
End bp2063045 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content61% 
IMG OID642613756 
Productprotein tyrosine phosphatase 
Protein accessionYP_001878296 
Protein GI187736184 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.718812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.00000825207 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACACAGC GCAAGCACAT CCTCTTCATC TGCACCGGCA ACACCTGCCG CAGCCCCATG 
GCGGAAGGCC TGTTCCGGAA ACTTTCCGCG CACCATCCGG AATGGCAGGC CGGTTCCGCA
GGAACAGCCG CATGGCCCGG GCAGGCAGCC AGTCCGGAAA CGCTCCACGT CCTCCGGGAG
CATGGCGTCA ATCTCTCCAG CCATGAAAGC CGCCCTGTTA CGGATGAACT GATGAAAAAC
GCCACAGATG TCTACGCCAT GACGGAAAGC CACCTGGCCG CCCTGCTTGC CAATTTCCCC
GAACATGCGG ACAAGGTCAG GCTGGTCACC TGCTACACGG GCAACCGCGG CATCGCCGAC
CCCATCGGCT GCGGACAGAC AGCCTACAAC AATGTAGCGC GGCAATTGAC AACCGCCATC
CAGGCCATCA TTGCCCGGAT GGAGCAACAG GAGTAG
 
Protein sequence
MTQRKHILFI CTGNTCRSPM AEGLFRKLSA HHPEWQAGSA GTAAWPGQAA SPETLHVLRE 
HGVNLSSHES RPVTDELMKN ATDVYAMTES HLAALLANFP EHADKVRLVT CYTGNRGIAD
PIGCGQTAYN NVARQLTTAI QAIIARMEQQ E