Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1697 |
Symbol | |
ID | 6274633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 2062590 |
End bp | 2063045 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642613756 |
Product | protein tyrosine phosphatase |
Protein accession | YP_001878296 |
Protein GI | 187736184 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.718812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.00000825207 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACACAGC GCAAGCACAT CCTCTTCATC TGCACCGGCA ACACCTGCCG CAGCCCCATG GCGGAAGGCC TGTTCCGGAA ACTTTCCGCG CACCATCCGG AATGGCAGGC CGGTTCCGCA GGAACAGCCG CATGGCCCGG GCAGGCAGCC AGTCCGGAAA CGCTCCACGT CCTCCGGGAG CATGGCGTCA ATCTCTCCAG CCATGAAAGC CGCCCTGTTA CGGATGAACT GATGAAAAAC GCCACAGATG TCTACGCCAT GACGGAAAGC CACCTGGCCG CCCTGCTTGC CAATTTCCCC GAACATGCGG ACAAGGTCAG GCTGGTCACC TGCTACACGG GCAACCGCGG CATCGCCGAC CCCATCGGCT GCGGACAGAC AGCCTACAAC AATGTAGCGC GGCAATTGAC AACCGCCATC CAGGCCATCA TTGCCCGGAT GGAGCAACAG GAGTAG
|
Protein sequence | MTQRKHILFI CTGNTCRSPM AEGLFRKLSA HHPEWQAGSA GTAAWPGQAA SPETLHVLRE HGVNLSSHES RPVTDELMKN ATDVYAMTES HLAALLANFP EHADKVRLVT CYTGNRGIAD PIGCGQTAYN NVARQLTTAI QAIIARMEQQ E
|
| |