| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1584 |
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| Symbol | |
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| ID | 6273650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1904390 |
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| End bp | 1905658 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642613644 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001878185 |
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| Protein GI | 187736073 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.738971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAAT ATCAATACAC AGCACTTGAC CATAAAGGCG ACCAGAAAAC AGGTACCCTG
GAGGCCAATT CCGAAGCGGA GGCCATGGAA TCCATCCGGG CGCATGGCCT GTACCCCACC
CAGATCGTAG AAGCGGGCAA GGGCAAGATT CAGCAGACGC CTGCCGCCAA GAAAAAGGCC
AAGGGAGCCA AGAAGCAAAA AGGCAAGCTG GGAGGCAAAA TCAAGGCCAA GGCTCTGATG
ATTTTCACCC GCCAGCTTGC TACGCTGATT GACGCGGGGC TTCCCCTGCT CCAGAGTTTG
AACGTGCTGG CCAAACAGGA GGCAAACCCC AACCTGCGCG TAACCATTGA GGCTCTTGGA
GATTCCGTTC AGGGCGGCTC CACCTTCTCG GAAGCCCTGG CCCAACACCC CAGAATTTTT
GACCGCCTGT TTGTCAACAT GGTAAAGGCC GGGGAACTGG GCGGTGTGCT GGAAGTCGTG
CTGAACCGTC TGGCGGAATA CCAGGAAAAG GCCCAAAAGC TGAAAAGCAA GGTGATCTCC
GCCATGGTGT ATCCCTCCAT CGTCCTGTTT ATCGCCGTAG GCATCGTGAT CTTCCTGATG
CTGGTCATCG TGCCCAAATT CAAGGCGATG TTCGCAGAAC AGAACCAGGA ACTTCCCGGT
ATTTCCGAGT TTGTGTTCGG CATCAGCGAC TGGTTCATGG CCGCCCCCTT CTTTGTGCCC
AATGCCGTCA TTCTGGCCGC GGTAGTCGCC ATCCTGTACG CTGTTTTCAC GGCCATGAGC
AAGACGCCCA ACGGACGCCG CAAGATTGAC TCCGCTCTGC TGACCATGCC GGTCATCGGC
AATGTGCAGA GCAAAAGCGC CATCGCCCGC TTCGCCCGAA CCTTCGGTAC GCTGGTGACT
TCCGGCGTCC CCATCCTCCA GGCGCTTACC ATCACGAAGG ATACCGCCGG CAACATGATC
GTGGGAGACG CCATCGGCCT CATCCATGAC TCCGTCAAGG AAGGCGAATC CGTAGTTACG
CCCATGTCCT CCTCCAAGCT TTTCCCGCCC ATGGTAATCT CCATGGTGGA CGTGGGGGAA
GAAACCGGCC AGTTGCCGGA CATGCTCCTG AAAATCGCGG ACGTGTATGA TGATGAAGTG
GACAATGCCG TGGGAGCTAT GACCTCCATG CTGGAACCCA TCATGATCGT ATTCCTGGCC
GTGGTCGTGG GCGGCATCGT GTTCGCCATG TTCCTTCCCC TCCTGCAGGT TATTGAAAAG
ATGGGATAA
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| Protein sequence | MPKYQYTALD HKGDQKTGTL EANSEAEAME SIRAHGLYPT QIVEAGKGKI QQTPAAKKKA
KGAKKQKGKL GGKIKAKALM IFTRQLATLI DAGLPLLQSL NVLAKQEANP NLRVTIEALG
DSVQGGSTFS EALAQHPRIF DRLFVNMVKA GELGGVLEVV LNRLAEYQEK AQKLKSKVIS
AMVYPSIVLF IAVGIVIFLM LVIVPKFKAM FAEQNQELPG ISEFVFGISD WFMAAPFFVP
NAVILAAVVA ILYAVFTAMS KTPNGRRKID SALLTMPVIG NVQSKSAIAR FARTFGTLVT
SGVPILQALT ITKDTAGNMI VGDAIGLIHD SVKEGESVVT PMSSSKLFPP MVISMVDVGE
ETGQLPDMLL KIADVYDDEV DNAVGAMTSM LEPIMIVFLA VVVGGIVFAM FLPLLQVIEK
MG
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