Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1576 |
Symbol | |
ID | 6275556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1898780 |
End bp | 1899238 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642613636 |
Product | SsrA-binding protein |
Protein accession | YP_001878177 |
Protein GI | 187736065 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0691] tmRNA-binding protein |
TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCCG ACATTTCCAC CAACAAAAAA GCCCGCCGGG ATTACGAAAT TCTGGACACC TACGAATGCG GCATGGAACT CAAGGGAACG GAAGTCAAAT CCATCCGCGC CGGCAAGGTG AATATTGCCG ATTCCTTCGC CAGGGTGGAA AACGGCCAGA TGCTCCTGTA CGGCTGCGAC ATCCAGCCCT GGGAGACAGC GGGAGAATTC TTCCAGCACC AGGCGCGCCG GCCCCGCCGC CTTCTTCTTC ATAAACGGGA AATTTTCAAA CTGGAACAGC AGACCTCCCA GAAAGGCTGC TCCCTGGTAG CTCTCAAGCT GTATTGGAAA AACGGCAAGG TGAAACTGGC TCTAGGCCTG GGCAAGGGCA AAACCCACCG CGACCAGCGC TACGATTTGA AAGCCCGCGT GGAAATGCGC GAAGCCCAGC GGGAAGTGGC CCGCATCAAC CGCCGTTAA
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Protein sequence | MSSDISTNKK ARRDYEILDT YECGMELKGT EVKSIRAGKV NIADSFARVE NGQMLLYGCD IQPWETAGEF FQHQARRPRR LLLHKREIFK LEQQTSQKGC SLVALKLYWK NGKVKLALGL GKGKTHRDQR YDLKARVEMR EAQREVARIN RR
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