Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1336 |
Symbol | |
ID | 6274614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 1613286 |
End bp | 1614029 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642613392 |
Product | peptidase S49 |
Protein accession | YP_001877941 |
Protein GI | 187735829 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.00354766 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACCGT TATATTGTGA AGAAACTGCA TGGCTGGCGA AGATTCGCCA GCGGAAGAGC CTGGAACTGA AAGCCGCAGG GAATCCGGAT TTTGACTTCT CATTTTTCAT CCAGACACGC CAAAAAGCGC GGGTAATTGG GTCATCCTTG GTGATTGACG TGATTGGGCC TCTATACGGT GACGGCGTGC CGTTGAATGA AGTCCTGGGC GGCACGAATT ATCAGTCCAT CGTGAAGGAA ATAAAGGGTG CTGCCGGGAA CATTGATGAA GTTGTTTTCA TTTTTGACTC TCCGGGAGGT GACGTGCAAG GCTGTCATGA AACAGCAGAA TTGATTAAAT CTCTGCCAGT GGAAACAGTG GCTTATGTCA AAGGCATGTG CTGCTCTGCC GCCTATTATT TGGCTTCCGC TTGTGATCAA GTGGTCGTGA CGGAAACGGC GCTGGTTGGC AGTATCGGGA CGGTCATCAG CCTGTGGAAT GCCAAGAGTG AGGAAATATT GACCATCACG AATGATGATG CTGTTTTCAA GCATCCGGAA ACCCCGATGA ATACGGAGGC AATCGCCTAT TACAGGGATT TGTGCAACAA GATCGCCGGG CGGTTTCAGG AATTTGTGGC TTCAGGACGT CCCGGTTTAT CTGCGGATGC GTTTTCCGGC AAGGTTTTTG TGGCGGAAGA TGCTGTTTCC CTGGGCCTGA TTGATGATGT AATACCCTGG GTCGATTTTC CTGGAGTGGT ATGA
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Protein sequence | MKPLYCEETA WLAKIRQRKS LELKAAGNPD FDFSFFIQTR QKARVIGSSL VIDVIGPLYG DGVPLNEVLG GTNYQSIVKE IKGAAGNIDE VVFIFDSPGG DVQGCHETAE LIKSLPVETV AYVKGMCCSA AYYLASACDQ VVVTETALVG SIGTVISLWN AKSEEILTIT NDDAVFKHPE TPMNTEAIAY YRDLCNKIAG RFQEFVASGR PGLSADAFSG KVFVAEDAVS LGLIDDVIPW VDFPGVV
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