| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1292 |
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| Symbol | |
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| ID | 6273803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1567859 |
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| End bp | 1568986 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642613348 |
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| Product | Endoribonuclease L-PSP |
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| Protein accession | YP_001877897 |
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| Protein GI | 187735785 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.849013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACGG CGAATGCACC TGAACAACTG GAATGGTCCG GAAAAAACGG GGCGGAAGAA
CGCTTCTTCT GCATGACGGC GGAGCCGGGC GCAAGTTTTG AGGAAGAACT GCATTCCCTG
ATGACCAGGT ACCGCAATCT GGGGGGAGGG GAGGAAGATG AATTCCTGTT GCGTTTCCAT
GTCAGCGACC CGGTGCGCCA GTCGGCTGCG CTGCGGCGGA TGATAGGGGA GAGGAACTCC
TATGTTTCCA TGGTTGGCCA GCCCCCTGCG AACGGGGCCC GCGTAGCTCT GGAAGCCTGG
CACATCGGCG GAATGTTGGG AAAAAGGCAT ATGGCGGAAC AGGGCGGAAC GGTCGTGGAA
GCCCTCCGCG TTCATTACCG GCTGTTCCTG GCGGGCAAGA GGGAATTCTC CTCCCCGGAC
AGCTGCGGCC AGATGCGGGA GGAATTCCGC TGGCTGGACC GGATTGCCGC CTTACAGGGG
GGAGCCGTGC CGGATTTGAT TCACCGCACC TGGATTTATT GCCGGGACAT TGACAACAAC
TACCGGGGAT TGGTGGAAGG CCGCAACGGA TGCTTTGACC GTTACGGGCT GACTCCGGAG
AGCCATTTCA TCGCCAGTAC CGGCATTGAA GGCTGTACGG AGCTGCCGGG CCGCCTGCTG
CATATGGACA GTCTGGGCAT CGCGGGGCTG GAGCCCGGGC AGGTCCGGTA CATGGAAGCG
CCGGACTACC TGTCCCCCAC GCATGTGTAC CGGGTGGCCT TTGAGCGCGG CGTCCGTATT
GTGTACGGGG ACCGCTCCCA TTATTTCCTT TCCGGCACCG CCAGTATTGA CGCGGAGGGA
AACATTGTCC ATCCGGGGGA CGTGGTGGGC CAGACGGCCC GCACCCTGGA AAATATGAGC
GCCCTGATGG AAAGGAGCGG GGGAAGCCTG TCCGACCTGA AGCAGGCCGT AGTGTACCTG
CGCGACTGGG CGGACCGGGA AACGGTCCGG AACCGGCTGA TGGACTCTCC GCTGGCCGCT
GTGCCGCATG TGATGCTGAA AGCCCCTGTC TGCCGCCCCG GCTGGCTGGT GGAAATAGAC
GGAATAGCCG TTAATGGAGC CGGAGAGTCC GCCTTTGCCC CCTTGTAA
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| Protein sequence | MMTANAPEQL EWSGKNGAEE RFFCMTAEPG ASFEEELHSL MTRYRNLGGG EEDEFLLRFH
VSDPVRQSAA LRRMIGERNS YVSMVGQPPA NGARVALEAW HIGGMLGKRH MAEQGGTVVE
ALRVHYRLFL AGKREFSSPD SCGQMREEFR WLDRIAALQG GAVPDLIHRT WIYCRDIDNN
YRGLVEGRNG CFDRYGLTPE SHFIASTGIE GCTELPGRLL HMDSLGIAGL EPGQVRYMEA
PDYLSPTHVY RVAFERGVRI VYGDRSHYFL SGTASIDAEG NIVHPGDVVG QTARTLENMS
ALMERSGGSL SDLKQAVVYL RDWADRETVR NRLMDSPLAA VPHVMLKAPV CRPGWLVEID
GIAVNGAGES AFAPL
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