Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0820 |
Symbol | |
ID | 6274357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 965905 |
End bp | 966636 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642612870 |
Product | ErfK/YbiS/YcfS/YnhG family protein |
Protein accession | YP_001877434 |
Protein GI | 187735322 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.0420468 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCTC TCCTTGTTCT GGCCGCCTTC CCCATGGTGC TCATGGGGTG GGCGTCCTGT TCCCACTCCG GCACGGGCCA TGCGGCCCTG CCGGATCCGC GTGCCGTGGA CAAATCCGTT CCGGAATATA AAAACCCGTT TCATCCTTCC ACATACGCTC ATTTTGTAGC CCGCAAGGAC TACCGGAAAA CGTACGACGT CTATAAGGAC GATACCTTGC TGAACCGCCA GCCGAAAAAA TCCCGAAAAA TCTTCGTCTG CCTGGACGAA CAACGGGGCC AGTATCTGGT GGACGGCTTG GTTGCCATGG ACTTCCCCCT CTCCTCCGGC GTAAAAGCCT ATCCGACCAA AACGGGGGAC TACGCCGTTA TCTCCAAAAA GGAAGACCAT GCTTCCAACC TCTACGGCAA AATGTATGAT GCCGAAGGCA AATGCATCAA CTACAATGCC GAATCCACGG ATCCCATACC GGAGGGAGGT CGTTTTGACG GCTCTCCCAT GCCTTATTGG CAGCGTCTTA CCAACGCGGG GCTGGGCCTG CATGTAGGGA AAGTTCGGCG GCATCCTGTT TCCCATGGCT GCGTCCGTTT GCCGCGAAAT GTTGCGGAAA TCCTCTACAG GCAAACCAGC ATAGGAACGC CCGTTACCAT CCAGAAAACG CCGCTCCCCG TGCCGGAAGC GCAGAAAATC CCTCCCGCAC AACAACAGGA ATCCGGAGGC CGCAAACCAT AG
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Protein sequence | MKPLLVLAAF PMVLMGWASC SHSGTGHAAL PDPRAVDKSV PEYKNPFHPS TYAHFVARKD YRKTYDVYKD DTLLNRQPKK SRKIFVCLDE QRGQYLVDGL VAMDFPLSSG VKAYPTKTGD YAVISKKEDH ASNLYGKMYD AEGKCINYNA ESTDPIPEGG RFDGSPMPYW QRLTNAGLGL HVGKVRRHPV SHGCVRLPRN VAEILYRQTS IGTPVTIQKT PLPVPEAQKI PPAQQQESGG RKP
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