Gene Amuc_0820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0820 
Symbol 
ID6274357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp965905 
End bp966636 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content56% 
IMG OID642612870 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001877434 
Protein GI187735322 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.0420468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCTC TCCTTGTTCT GGCCGCCTTC CCCATGGTGC TCATGGGGTG GGCGTCCTGT 
TCCCACTCCG GCACGGGCCA TGCGGCCCTG CCGGATCCGC GTGCCGTGGA CAAATCCGTT
CCGGAATATA AAAACCCGTT TCATCCTTCC ACATACGCTC ATTTTGTAGC CCGCAAGGAC
TACCGGAAAA CGTACGACGT CTATAAGGAC GATACCTTGC TGAACCGCCA GCCGAAAAAA
TCCCGAAAAA TCTTCGTCTG CCTGGACGAA CAACGGGGCC AGTATCTGGT GGACGGCTTG
GTTGCCATGG ACTTCCCCCT CTCCTCCGGC GTAAAAGCCT ATCCGACCAA AACGGGGGAC
TACGCCGTTA TCTCCAAAAA GGAAGACCAT GCTTCCAACC TCTACGGCAA AATGTATGAT
GCCGAAGGCA AATGCATCAA CTACAATGCC GAATCCACGG ATCCCATACC GGAGGGAGGT
CGTTTTGACG GCTCTCCCAT GCCTTATTGG CAGCGTCTTA CCAACGCGGG GCTGGGCCTG
CATGTAGGGA AAGTTCGGCG GCATCCTGTT TCCCATGGCT GCGTCCGTTT GCCGCGAAAT
GTTGCGGAAA TCCTCTACAG GCAAACCAGC ATAGGAACGC CCGTTACCAT CCAGAAAACG
CCGCTCCCCG TGCCGGAAGC GCAGAAAATC CCTCCCGCAC AACAACAGGA ATCCGGAGGC
CGCAAACCAT AG
 
Protein sequence
MKPLLVLAAF PMVLMGWASC SHSGTGHAAL PDPRAVDKSV PEYKNPFHPS TYAHFVARKD 
YRKTYDVYKD DTLLNRQPKK SRKIFVCLDE QRGQYLVDGL VAMDFPLSSG VKAYPTKTGD
YAVISKKEDH ASNLYGKMYD AEGKCINYNA ESTDPIPEGG RFDGSPMPYW QRLTNAGLGL
HVGKVRRHPV SHGCVRLPRN VAEILYRQTS IGTPVTIQKT PLPVPEAQKI PPAQQQESGG
RKP