Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0665 |
Symbol | |
ID | 6273973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 782593 |
End bp | 783231 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642612717 |
Product | lipoate-protein ligase B |
Protein accession | YP_001877283 |
Protein GI | 187735171 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCA TCCGCATTCC CGGCCTGGCA GATTATCAGG AAACCTTGAG GCTCCAGGAA CAACTGGTCC GGGCCCATCA GGAAGACCCG GACAGGGAAA ACGAACTGTT GCTGCTGGAA CATGCCGGAG TTTATACCAT CGGGCGTACA CGGAACCACG CCAGCCTGCA CCCCGGTTCC GTACTTCCCT TTCCCGTTCA TGAAATCAAC CGCGGCGGCC AGGCTACCTA CCACGGCCCC GGCCAGCTGG TCGGATACCC CATTACGGAC CTGAACCGCT GCGGCAGGGA TCTGCACCGT TACGTCACCA CCCTGGAGAA CACCCTGATT GAAACCTGTG CCCGGTTCGG CGTGCAGGCC CGCATCCGGG AAGGGCTGGT AGGGGTCTGG GTGGAAAACC GCAAAATAGC CTCCATCGGC GTCGGGGTGA AAAAGTGGAT TGCCATGCAC GGCTTCGCCC TCAATATAAC CCGGAAATCC CTGCCTCCCT TCCTTGCTAT TACCCCATGC GGCATCCAGG GCGTGCAAAT GACCTGCCTG GAGGATGAAA TGTCCTCCCC CCTGCCGGAA GGAAACCTGT TGAAATGTTT CGGAGACGTT TTTGCAGCAC TATGGGAAGA AAAATTTAAC CGGTCTTAA
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Protein sequence | MNIIRIPGLA DYQETLRLQE QLVRAHQEDP DRENELLLLE HAGVYTIGRT RNHASLHPGS VLPFPVHEIN RGGQATYHGP GQLVGYPITD LNRCGRDLHR YVTTLENTLI ETCARFGVQA RIREGLVGVW VENRKIASIG VGVKKWIAMH GFALNITRKS LPPFLAITPC GIQGVQMTCL EDEMSSPLPE GNLLKCFGDV FAALWEEKFN RS
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