| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0563 |
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| Symbol | |
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| ID | 6275530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 662604 |
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| End bp | 663287 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642612612 |
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| Product | hypothetical protein |
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| Protein accession | YP_001877181 |
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| Protein GI | 187735069 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.731892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACCC GCTTACTTAC CCCACGCAGC AAAGGTTTCA CGCTCATTGA AGTTCTCGTA
GTCATCGCCA TCATTGCCTT GCTGGCAGGC GTCTCCTACA GCATTTATTC CCATGCCACG
GAAACGGCAG CCAGAACGCG CTGTACGGAC AACCTGCGCC GCATTAGCGA CTGGGGCAAG
GAATTCGCAG GCCAGAACGG CGGAAAACTG CCCTCCAGCG GCATGAAAGA CAGCCTCCTG
AGTGCCAGGG AATGCCGGAA CTGGTGGGAC GCCCTGGCGC CCATCGTTAA TGCGGAACAA
CCCGACCTGA TCGCCCGGAA CGCCAAGGAA CCCAACATGC TCCCGGACAC GTTCCGCTGC
AAAAACGACA AGCGTCCGGA AATCCTCGGA GCGGAGGATG CCAACCTTCC CGCCGGGCCG
GACACCATTT CCTACACCAG CTGGCTGGAC AACCGGAAGG GGCGTCCTAT GAATGTGGCG
CGCGGCCAGG CCCTGCGGGG CAAACCCTGG ATCAGCGACG GCATCCCGAT TGACGGGCGC
AGCGTCATCA CGGAACAGGA TTTTGAGGAA ATCGTAGTCC CGGCCCTTGA ACGCCACCAG
GGAGGAATCA TGGTGCTTTA TGCGGACGGG AAAATATCCC CCGTTGAGGA CCCTACGCTT
AACAAAGTCA CCCAAGGTTC CTGA
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| Protein sequence | MKTRLLTPRS KGFTLIEVLV VIAIIALLAG VSYSIYSHAT ETAARTRCTD NLRRISDWGK
EFAGQNGGKL PSSGMKDSLL SARECRNWWD ALAPIVNAEQ PDLIARNAKE PNMLPDTFRC
KNDKRPEILG AEDANLPAGP DTISYTSWLD NRKGRPMNVA RGQALRGKPW ISDGIPIDGR
SVITEQDFEE IVVPALERHQ GGIMVLYADG KISPVEDPTL NKVTQGS
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