Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0562 |
Symbol | |
ID | 6275560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 661692 |
End bp | 662456 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642612611 |
Product | Triose-phosphate isomerase |
Protein accession | YP_001877180 |
Protein GI | 187735068 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.525761 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCGCA AACCCATCAT TGCCGCCAAC TGGAAGATGA ACATCGGCCC CGCCGAAGGC ACCCAGTTCA TCGAAAGCTT CAAAAACCTC ATTAAGGGGA AAGACGTCGC GTGTGACGTG GTCATCATCC CTCCCTTCAC CACCATTCCC TCCGTGCAGA ACGCTCTGGG CGGTTGCTCC TGCATCGCCG CCGGAGCCCA GAACGTCTCC CAGTACGACA ACGGAGCTTA TACCGGTGAA ATCTCCACCA GCATGCTGAA TGAACTGAAC CTCAAGTATG TGGTGCTCGG CCACAGCGAA CGCCGCCAAT ATTTCGGAGA AACGGATGCC ATTATCAACT CCAAAATCAA GAAGGCCATC GCCGCAGGCA TCACCCCCAT TTTCTGCATC GGAGAAACGA AGGACGAACG CCTGGGGGGC ATTTTGGAAC CCGTGCTGGA AATCCAGCTC AAGGGCGGCC TCAAGGATCT CACCCCGGAG GAGGTATCCA ACCTGGTCAT CGCCTATGAA CCCGTCTGGG CCATTGGCAC CGGCCTGACC GCAACTTCCA AGGAAGCCCA AGAAGCCCAT TCCTTTATCC GCAAGGTTAT TTCCGACGTC TTCGGAGCAG ACGCCGCCGC CAAGGTGCGC ATCCAGTACG GCGGCTCCGT AAAACCGGAA AACGTGGAGG AACTCATGGC CCAGCCGGAC ATTGACGGGG CTCTGGTTGG CGGCGCTTCC CTGAAGCCGG AATCCTTCGC TGCTCTGGTA ACTTCCGCCA AATAA
|
Protein sequence | MSRKPIIAAN WKMNIGPAEG TQFIESFKNL IKGKDVACDV VIIPPFTTIP SVQNALGGCS CIAAGAQNVS QYDNGAYTGE ISTSMLNELN LKYVVLGHSE RRQYFGETDA IINSKIKKAI AAGITPIFCI GETKDERLGG ILEPVLEIQL KGGLKDLTPE EVSNLVIAYE PVWAIGTGLT ATSKEAQEAH SFIRKVISDV FGADAAAKVR IQYGGSVKPE NVEELMAQPD IDGALVGGAS LKPESFAALV TSAK
|
| |