| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0541 |
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| Symbol | |
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| ID | 6275124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 638613 |
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| End bp | 640160 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642612591 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_001877160 |
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| Protein GI | 187735048 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.353694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGGCT CCACTATCAT CATCAATGCC GAAAAGCTCG AACGCCGCGT AGCCCTTCTG
GAAAACGGCG TATTGGAAGA ATACACCATC GAGCGCGAAG GCGAAGACAA CATCGTAGGC
GGCATTTTCA AAGGCCGTGT CAAGAACATC GAACCGGGCC TCAAAGCCAT GTTCGTGGAC
ATCGGGCAGG AAAAAAACGC CTTTCTGCAC TTCTGGGACG CGCTTCCCGC CGCACTGGAC
TCCAGCCTGG AAGAAATCGA ACGCGAAGGC CGTCCGAAAA AACAGCAGCG CAAAATCACG
TCCAAAGACA TCCCGGACAT CTATCCCATC GGCTCTGAAA TCATGGTGCA GGTCACCAAA
GGACCGATCG GCACCAAGGG TCCCCGTGTC ACAACGAACG TATCCCTGGC GGGACGCTAC
CTGGTCCTGA TGCCTTTTAC GGACCAGTTC GGCATCTCCC GTAAAATTGA AGACCCCAAA
GAGCGCCTGC GCCTGCGCCA GATCATGCAG AAACTGAATG TTCCGGACGG AATGGGCATC
ATCATGCGCA CGGTGGCCCA GGGCCAGCGC TACCGCCACT TTGTCCGCGA CCTCGCCATG
CTGCTGGAAC AATGGTACAG CGTGGAAGAA AAGAAGGAGG CCAATCCGGC CCCCGTCTGC
GTGTACAAGG AGCCGGACCT GATTGAACGC ACGGCACGGG ATTTCCTTAC GGACACCGTA
GACAACATCA TCTGCGACAA CGCGGAAACC ACGGAACACA TGCGCGCCAT TGCCGGAAAA
ATCTCGCGCC GCGCCAAGCG CCACATCCAG CACTTCCCCG TGCGCACGCC TATCTTTGAA
GAACTGGGAA TTGAAAAACA AATCAATGAA GCTTTCCAGC GCCAGGTGCT CCTGCCCTGC
GGAGGCTACC TGGTGATTGA CGAAACGGAG GCGCTGATCG CCATTGACGT CAACACCGGA
CGCAACAAGG GCACCAAGGA TCTGGACAAG ACCATTCTGG ATACCAATCT GGAAGCCGCC
TATGAAATCG CCCGCCAGCT TCGCCTGCGC AACATCGGCG GTCTGGTGGT GGTGGACTTT
ATCGACATGC GCCACAGGAA GGACCAGCAG GCCGTTTATA AGGCCATGAA GGACCGCCTG
AAACGGGACA AGGCAAAAAC CCAGGTACTG CAGATCACCC CCATCGGCCT GATGGAAATG
ACGCGCCAGC GGCTCAACGA GAGCCTCAGG GAATCCGTTC ATGATCCGTG CCCGTACTGC
GGAGGCAGGG GCCGCGTCAA ATCCGTGATG ACCATGAGCG TGGAAATTCA GCGGCAAATT
TACGCCTGCA TCCAGAAATA CCGGGATACC ATCGGAGACA TGGTCATCGT CGTCAACTCG
GAAGTGCTCT CCCGCTTCAA GAATGAAGAC GCCAGCCTGC TCATGGAACT GGAACGCCAG
CACAGCGGAA GGCTGATTTT CCGGGGCGAC CACAACCAGC ACCGCGAATC CTTCGCCATT
TACGACGCCC GATACGACAA CAAACCCCTC TACCAGTCCG GGCAATAG
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| Protein sequence | MEGSTIIINA EKLERRVALL ENGVLEEYTI EREGEDNIVG GIFKGRVKNI EPGLKAMFVD
IGQEKNAFLH FWDALPAALD SSLEEIEREG RPKKQQRKIT SKDIPDIYPI GSEIMVQVTK
GPIGTKGPRV TTNVSLAGRY LVLMPFTDQF GISRKIEDPK ERLRLRQIMQ KLNVPDGMGI
IMRTVAQGQR YRHFVRDLAM LLEQWYSVEE KKEANPAPVC VYKEPDLIER TARDFLTDTV
DNIICDNAET TEHMRAIAGK ISRRAKRHIQ HFPVRTPIFE ELGIEKQINE AFQRQVLLPC
GGYLVIDETE ALIAIDVNTG RNKGTKDLDK TILDTNLEAA YEIARQLRLR NIGGLVVVDF
IDMRHRKDQQ AVYKAMKDRL KRDKAKTQVL QITPIGLMEM TRQRLNESLR ESVHDPCPYC
GGRGRVKSVM TMSVEIQRQI YACIQKYRDT IGDMVIVVNS EVLSRFKNED ASLLMELERQ
HSGRLIFRGD HNQHRESFAI YDARYDNKPL YQSGQ
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