| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0523 |
|---|
| Symbol | |
|---|
| ID | 6274874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 615234 |
|---|
| End bp | 616205 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642612573 |
|---|
| Product | KpsF/GutQ family protein |
|---|
| Protein accession | YP_001877142 |
|---|
| Protein GI | 187735030 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCATT TAACACGCGC CAAATCCGTT TTTGAAATGG AGATTGAAGA GCTGCGCGGC
GTCCTGTCCC GGCTGGACGA CAATTTCAAC AAGGCTGTGG ACCTCATGTC CCAGGCTCTG
GACCGCGGCA ACAAGATCGT CATTGTAGGC GTAGGCAAAT CCGGCAACAT CGGGGCCAAG
ATCGTCGCTA CCCTGAACTC TACGGGAACG CCCACCGTTT TGCTGGATTC CCTGAACGCC
CTGCACGGGG ATCTGGGCAT CGTCCAGGAC GGGGACGTCT GCATTGCCAT GTCTTTCTCC
GGAGAAACTT CGGAGCTGCT GACCCTGCTC CCCTTCATCA AGCGTTTTGA ACTGCCCATC
ATTTCCATGA CGGGCAACAC GGGCTCATCC CTGGCCAAAT ACTCGGATAT CGTTCTGGAC
ACAGGCGTTT CCCGGGAAGC CTGCCCGCTG AACCTGGCCC CTACTTCCAG CACCACGGCC
ATGCTGGTCA TGGGAGACGC CCTCGCCATG GCCCTGGTGG AAGCGCGCCA CTTCACCGCG
CGGGACTTCG CCAAACGCCA CCCCGGCGGT TCGCTGGGGC GTGCCCTGCT CACCCGGGTG
AGCGATATCA TGCGCCGTGG AGAAGAAATG GCCATGCTTC CGGAAACCGC CTCCGTGAAC
GACTGCCTGA AGGCGATGAC CACAGCCCAC GCCGGTGCCT GCGTCCTGCT GACGGAGGAC
CGCAAGCTGG CCGGCATCTT CACCCACGGA GACTTTGTCC GGGCATACGG GGCGAACCCT
CTCATCGGAG AACAGCCCGT CAGCGGGTTC ATGACCCGCA ATCCCATTTA TGTCATGGAA
GACGACCTGG CCGCTGAAGC GGCGAAAGCC GTGAGCAACC GCCACATTGA CGATCTGGTG
GTGCTCAACG CGGAAATGGC CCCCGTGGGC ATCATTGACC TCCAGGACCT TGCCAGGCTG
AAACTGGTTT AA
|
|---|
| Protein sequence | MNHLTRAKSV FEMEIEELRG VLSRLDDNFN KAVDLMSQAL DRGNKIVIVG VGKSGNIGAK
IVATLNSTGT PTVLLDSLNA LHGDLGIVQD GDVCIAMSFS GETSELLTLL PFIKRFELPI
ISMTGNTGSS LAKYSDIVLD TGVSREACPL NLAPTSSTTA MLVMGDALAM ALVEARHFTA
RDFAKRHPGG SLGRALLTRV SDIMRRGEEM AMLPETASVN DCLKAMTTAH AGACVLLTED
RKLAGIFTHG DFVRAYGANP LIGEQPVSGF MTRNPIYVME DDLAAEAAKA VSNRHIDDLV
VLNAEMAPVG IIDLQDLARL KLV
|
|---|
| |