| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0424 |
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| Symbol | |
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| ID | 6275813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 507571 |
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| End bp | 508455 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642612474 |
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| Product | NusB antitermination factor |
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| Protein accession | YP_001877043 |
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| Protein GI | 187734931 |
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| COG category | [K] Transcription |
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| COG ID | [COG0781] Transcription termination factor |
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| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.518961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTCAC GCAACCAAAT CAGACAAGCC GCCCTCCAAT ACCTTTACGC CGCCTCTCAG
ACGCCGGAAA CGGAACGGGA GGGAATCTGG GACATCCTGA TGGAACCTTT CCGGGGCGAC
TACTGCAAAC TCAAGGCCAA GGCCGTCTCC GGCCATCTTA CACGGGACTA TCCGGACAAG
CTGCGCCTCT TCATCACCCG TGCGCGGGAA ACGGCGGACA AACTTCAGCA AGACCCCCTT
ACCCTGCCCG TCCGTGACCA GCTTCAGGAC CTGCTGGCCA AGGAAGGAGA ATTCAACGCC
TCCCTGCTCC GGCTGAAAAA AGCCCTGCAC GAGGATCCCT CCAATGACAG GGGGTCTCTT
TCCGCCGCCT GCGACGCCGC TCAGGGACTC AATACCGCAC TGATGCAGAT GCGCCGCCGC
CTGCTGGACA CGCTCAAGGA CTTCCCTGCC TATAACGCAA TCTGGCCCTC CCTCATTTCC
TCCTGCAGCA AACTCCAGGA AATCAATGAC CGCATCAACT GCCTCATTCA CCCGGACGAC
CGCCCCTCCC TGGCGGAAAT AAAAAAAGTG GTGGAGGCAG GGAGGGATGC GGAGGAACTC
TACCGGGAAG CCAAAACCCT GGGAGAAGAC ATCCTGCGCC GCCGGGACGG GCTGGACGCC
GCCATCGACT CCACCCTGGA AAACTACTCC CCTGAACGTG TCAGCGCCAT TGACCGCGCC
ATTCTGCGCC TGGGGGCCTA TGAACTCCTC CATCGCAAAG ACCTCCCGGC CCCCATCGTC
ATCTCGGAGG CCATCCGCCT GTCGGAACGC TTCTCCTCTG CGGAATCCCC CCGCTTCATC
AACGGCGTCC TGGCCGGAAT CTCAAAAACG GGACGCCCGG CATAA
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| Protein sequence | MLSRNQIRQA ALQYLYAASQ TPETEREGIW DILMEPFRGD YCKLKAKAVS GHLTRDYPDK
LRLFITRARE TADKLQQDPL TLPVRDQLQD LLAKEGEFNA SLLRLKKALH EDPSNDRGSL
SAACDAAQGL NTALMQMRRR LLDTLKDFPA YNAIWPSLIS SCSKLQEIND RINCLIHPDD
RPSLAEIKKV VEAGRDAEEL YREAKTLGED ILRRRDGLDA AIDSTLENYS PERVSAIDRA
ILRLGAYELL HRKDLPAPIV ISEAIRLSER FSSAESPRFI NGVLAGISKT GRPA
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