| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0394 |
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| Symbol | |
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| ID | 6274804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 476127 |
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| End bp | 476885 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642612445 |
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| Product | hypothetical protein |
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| Protein accession | YP_001877014 |
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| Protein GI | 187734902 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTAT CTTTTGCAAC ACACCAGTTA CGCAGGGGGT TTACCCTGAT TGAACTCTTG
GTTGTCATTG CCATTATCGC CCTGCTGGCT TCCGTGGCCT ATGGTCCTAT CCTGAACCAG
ATCAACAAAG GCGACCAGAT GCAGGCCCTG ACCAACATGA AGAACGTGGG CGTAGCGATG
AACGAGTTCA AATCCAACAG CAAACTGGGC AATTTCCCCG ATGACATCAC TGCCGACCGC
GTTGTTGCCC AGCATAATTA TATGAGCGGC CTGGGCGCAC TTCAGGGCGA TACTTCCAAT
GACTATTTCC GTCAGCTTCT GGGCAATGAG TCTGTTTCCG AAAGCAACTT TTACGCCAAA
GTTCAGACTC CTTCCGGCGG TTCCACCGTT ACTCCCAACG GTGAAATTTA CGACGGTCAG
GCCCTGACCC CCGGTGAAGT GGGTATTTCC TACGTCATGC GCAAGGGTGA CAATAACAAG
AAAGTGGGTA TTGGAAGTTC CGTGGGGGAA TATCCCCTGA TGGTCACTTC CGTGCTTCCT
GGTGAAGACG GCAGCACCGT TGTGGCTGGC AATGCCGTGC GTTTTGACCC GGAAAGCTTC
CGCGGCAAGG TTCTGATTTT CACGACTGCC CAGAGTGCCA AGACCCTGGA ACTGGACGAC
AACGACAACC TTCAGGATAC CTTCATTCCC AAGAGAAGGG GCAAGGACAT CAGCGACCAG
TTCCTGATCC TCACGCCTGA TTTCAGCGGC CAGGAGTAA
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| Protein sequence | MKVSFATHQL RRGFTLIELL VVIAIIALLA SVAYGPILNQ INKGDQMQAL TNMKNVGVAM
NEFKSNSKLG NFPDDITADR VVAQHNYMSG LGALQGDTSN DYFRQLLGNE SVSESNFYAK
VQTPSGGSTV TPNGEIYDGQ ALTPGEVGIS YVMRKGDNNK KVGIGSSVGE YPLMVTSVLP
GEDGSTVVAG NAVRFDPESF RGKVLIFTTA QSAKTLELDD NDNLQDTFIP KRRGKDISDQ
FLILTPDFSG QE
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