| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0329 |
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| Symbol | |
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| ID | 6275023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 387616 |
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| End bp | 388983 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642612381 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001876950 |
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| Protein GI | 187734838 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.024983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.000000313629 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTAACGG CATCTCAAAT ACTTGACCTT GTAAAAGGAG GCGAAGGCTA CAATGTGGAC
TTCAAACGCA GTGTGCCTTC AAAAGTAAGA GAACTATTCG AGGAAGTGGC TGGTTTTGCT
AATGCCGCCG GAGGTTATGT TCTCATTGGT GTTAGTGATG ACAACAAGAT TATAGGCGCC
GAGATAGACA ATAATAAGCG TTCAGCAATC CAAGACACCA TCGGTGAAAT TTCTCCTGCC
CTGCATTGCG TCTTTTATCC GATGGATGTT GATGGTAAGA AGATATGGGT TGTTGATGTG
CCAAGCGGTA AGGACAAACC TTACATCGCC GGAGGCGTGA TATATGTAAG AGAGGGTGCC
AACTGCCAAA AGTTGAGAAC GGCTGAAGAA ATACGGGCTT TCTTTGCCGA ATGTTCAAAG
ATATTTTATG ATGCCATTCC ATGCAAATGG TTTGGCATTG ACGAGGACAT AGACAGCCAT
AATTTCCGTT CCTTTCTTGA AAAATCTCAC CTATCTGAAG ATTTACCGAT TCGACAATTA
TTCGACAACC TGGAACTAAC AACCGATGAT GGACGAGTGA AGAATGCCGC TGCTCTTTTC
TTCGGCAAAG AGCCGGAGAG GAAGTTTGCT CATGCTGTCG TAAGATGTTT GAGATTCAAA
GGTTTTGACA AGGTCCACAT CATAGATGAC AAGACTTTTG GAGGACCACT ATATCAGCAG
TATCTCAATA CTCTCTCGTG GATTGAGAGC AAACTTGAAG TAGAGTACAT CATCGAAGGT
ACGGGGCCAC GAAAAGAAAT ATGGGAGATA CCGCTGGATG TTTTCAAGGA GTCGGTTATG
AACGCCATCT GTCATCGCGA CCTGTATGAA GAGGGTGCGA CAGTGATGGT TGAAGTATAT
GATGACCGGG TTGAGATTTC CAATCCCGGA GGTCTTCTTC CCATTGTTGC AGAAAACTTC
GGAGAAAAGA GTATGAGCCG GAATCCACTT ATTTTCGGAC TATTCACAAG AATGCAGCTT
GTTGAGAAAG TAGGCTCCGG CATTCCCCGT ATGCGCCGCC TTATGAAAGA AGCTGGTCTG
CCTGAACCCG AATTTGACAA CAAGGGCTTC TTTACCGTTA CTTTTATGAA GCGAACCAAG
TCCCTAAGAA CCACCGATGA TAAACTAAAT GATAGATTAA ATGATAGGAT AAATTCACGA
GAGAAACAAG TTCTTCTGAT TTTATCTAAA ACTCCTGGTC TAAGGACCAA TGAGTTGTCT
ACAATGATAG AAGTCTGTGT CCCTACGTTG TCTCGCACAT TGAAGAATCT AATCAGTCTA
GGCTTGATAG AATATCGTGG AGCAAAAAAA ACGGAGGATA TTATATAA
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| Protein sequence | MLTASQILDL VKGGEGYNVD FKRSVPSKVR ELFEEVAGFA NAAGGYVLIG VSDDNKIIGA
EIDNNKRSAI QDTIGEISPA LHCVFYPMDV DGKKIWVVDV PSGKDKPYIA GGVIYVREGA
NCQKLRTAEE IRAFFAECSK IFYDAIPCKW FGIDEDIDSH NFRSFLEKSH LSEDLPIRQL
FDNLELTTDD GRVKNAAALF FGKEPERKFA HAVVRCLRFK GFDKVHIIDD KTFGGPLYQQ
YLNTLSWIES KLEVEYIIEG TGPRKEIWEI PLDVFKESVM NAICHRDLYE EGATVMVEVY
DDRVEISNPG GLLPIVAENF GEKSMSRNPL IFGLFTRMQL VEKVGSGIPR MRRLMKEAGL
PEPEFDNKGF FTVTFMKRTK SLRTTDDKLN DRLNDRINSR EKQVLLILSK TPGLRTNELS
TMIEVCVPTL SRTLKNLISL GLIEYRGAKK TEDII
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