Gene Amuc_0314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0314 
Symbol 
ID6275062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp371302 
End bp371562 
Gene Length261 bp 
Protein Length86 aa 
Translation table11 
GC content52% 
IMG OID642612368 
ProductExonuclease VII small subunit 
Protein accessionYP_001876937 
Protein GI187734825 
COG category[L] Replication, recombination and repair 
COG ID[COG1722] Exonuclease VII small subunit 
TIGRFAM ID[TIGR01280] exodeoxyribonuclease VII, small subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.311113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAC AACGGAAAAA CGCTCCCGGA TTTGAAGAAT CCGTAGCACG CCTGGAAGAA 
ATCATACGCC TGACGGAAGC CCCCGTCACC GAGCTGGAAG ACATGATAGC CCTGGTGGAA
GAAGGCAATA AGCTCATCCG TCACTGCCGC AGCATCCTGC ATGATGCGGA ACTGCGCATT
CAAACTCTCA GCAACCCGGA AACCGTTCAG GATAAAACGG ATACTGATGA ACCAGACAGC
AATGAATTCT CCCTCACCTG A
 
Protein sequence
MAKQRKNAPG FEESVARLEE IIRLTEAPVT ELEDMIALVE EGNKLIRHCR SILHDAELRI 
QTLSNPETVQ DKTDTDEPDS NEFSLT