| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0296 |
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| Symbol | rplP |
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| ID | 6275109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 355649 |
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| End bp | 356071 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642612350 |
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| Product | 50S ribosomal protein L16 |
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| Protein accession | YP_001876919 |
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| Protein GI | 187734807 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0197] Ribosomal protein L16/L10E |
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| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.980889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTTTAA TGCCCAAGAG AGTGAAGCAC CGCAAGATGC ACCGCGGCAG CCGTTCCGGC
AATGCCACCA GCGGTACCTA TGTTGCTTTT GGTGACTTCG GCCTTCAGGT GCTCGACCGC
GGTTGGATCA CCAACAACCA GATTGAAGCC TGCCGTATTG CGATCAACCG TTACCTGAAA
CGTAAAGGTA AGGTGTTCAT CCGCATTTTC CCGCAGAAAT CCTTTACGTC CCGTCCCCCG
GATACTCGTA TGGGTAAGGG TAAGGGCGCC GTGGAAGGCT GGGTAGCCGT TGTCCGCCCC
GGCAACATTC TGTTTGAAGT AGGCGGCGTG ACCGAATCCC AGGCGCGTGA AGCCCTTCGA
CTGGCTTCCA ACAAGCTGGG CGTATCCACC CGCTTCGTCT ATCGTCAAGG CGTTCAACAC
TAA
|
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| Protein sequence | MPLMPKRVKH RKMHRGSRSG NATSGTYVAF GDFGLQVLDR GWITNNQIEA CRIAINRYLK
RKGKVFIRIF PQKSFTSRPP DTRMGKGKGA VEGWVAVVRP GNILFEVGGV TESQAREALR
LASNKLGVST RFVYRQGVQH
|
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