| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0204 |
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| Symbol | |
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| ID | 6275334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 253107 |
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| End bp | 254771 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642612250 |
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| Product | sodium ion-translocating decarboxylase, beta subunit |
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| Protein accession | YP_001876829 |
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| Protein GI | 187734717 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
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| TIGRFAM ID | [TIGR01109] sodium ion-translocating decarboxylase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.928975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTTT TTGATTCATT AATCACCTTT TTACAGGGGA TGGGCGTCTT CTCCCTATCA
TGGCAGATGG TAGGGATGTG GGGCATTGCC ATTCTCCTCC TGTATCTGGG TGTAGCCAAG
CAATACGAAC CGCTCCTGAT GGTTCCCATT GCTTTCGGCG CCCTCATTGC CAACATTCCG
GATAACGGAA TGCTCATCAC CCAGCTGAAC CAGCAGGTCA TCTCCTCCAA TGAACAGGGG
GAAGTAACCG CCACGTCTCT GAACAACGTG GGGTACCTGC GCGTTCACGT GGCTCCGCTT
CAGCAGGCTC CCTCCAAGGT GCCGGCCAAT CTGACCACGC CTGAATCCCG TGCCCAGTAT
CAGGAAATCA TGCAGCAGCC CATGCAGGTT TACCCCGGCA GCCAGCTGAC CGTTTCCAAG
ATCAAGTCCG TGCGGGAATC CCAGGAAAAA GCAAAAGCTG ACGCGGCCCG CCTGGGCGAC
GACAGCCTGA CGGTGGACCC CAACCTGAAG GATTTCCAGA ACGTGACGGA AGACAACGGC
AATGAACCGG TCTTCCTGCT CACGAACGGA GAAGGGACCA CCGTCGTCCG CCAGCAGGGC
GTCAATTACT TTGACACCAG CGGCAACCGG ATTCCGGTGG ATCTGAAAAC CCAGAAGCTG
GAGCCCCTGG TGGTTTCAGC CGCAGGCAAA TACGTGGCCG TAGGCCAGCA TACCCAGGAA
CTGCTGGTCA CCTCCATCCA CGGGGGCCTG TATGACTGGA TCGGGCTGGG CATCAAGGCT
GAAATTTTCC CGCCCATCAT CTTTCTGGGC GTAGGAGCCC TGACGGACTT CGGCCCGCTG
CTTGCCGCTC CGCGCACCCT GCTTCTGGGC GCAGCGGCCC AGGTGGGCGT AGCCGCCACG
TTCTTCATGG CCCTGTTCAT GGGGTTCACC CCGAATGAAT CCGCGTCCAT CGGCATCATT
GGCGGCGCTG ACGGCCCTAC CTCCATCTTC CTGACGATGA AGCTGGCCCC GCACCTGCTG
GGCGCCGTGG CCGTGGCCGC ATACACGTAC ATGTCCCTGG TTCCGCTGAT ACAGCCGCCC
ATCATGGCGT TGCTGACGAC CAAGAAGGAA CGCCTCATCC GCATGAAATC CCTGCGAACG
GTCAGCAAGA GCGAAAAACT GTTTTTCGCC GTGCTGGTAA CCATTGTCAC CATTTTGCTG
ATTCCGGACG CATCCCCGCT GATCGGCATG CTGATGCTTG GCAACTTCCT GCGCGAATGC
AAGGTGACGG AACGCTTGGT TCAGGCCTCC CAGAATGAAA TCATCAACAT CGTCACCATC
TTCCTGGGAA CCTCCGTGGG GCTCACGATG CAGGGCGACC GCTTCCTGCA GTCGGAAACG
CTGCTGATCA TCCTTCTGGG TATCGTCGCC TTCGGCGTGG CAACAGCGGG CGGAGTGATT
GCCGCCAAGA TTATGAACCT CATCTGGCGC AAGAATCCGG TCAACCCCCT GATCGGGTCC
GCAGGCGTCT CCGCCGTCCC GATGGCAGCC CGCGTCTCCC ACAATGTGGG CCAGAAGTAC
GACCCCTCCA ACTACCTGCT CATGCACGCC ATGGGTCCGA ACGTTGCAGG CGTGATCGGC
ACCGCAGTCA TCGCGGGCTA CTACATCGCC ACTCTGGCGA AATAA
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| Protein sequence | MSLFDSLITF LQGMGVFSLS WQMVGMWGIA ILLLYLGVAK QYEPLLMVPI AFGALIANIP
DNGMLITQLN QQVISSNEQG EVTATSLNNV GYLRVHVAPL QQAPSKVPAN LTTPESRAQY
QEIMQQPMQV YPGSQLTVSK IKSVRESQEK AKADAARLGD DSLTVDPNLK DFQNVTEDNG
NEPVFLLTNG EGTTVVRQQG VNYFDTSGNR IPVDLKTQKL EPLVVSAAGK YVAVGQHTQE
LLVTSIHGGL YDWIGLGIKA EIFPPIIFLG VGALTDFGPL LAAPRTLLLG AAAQVGVAAT
FFMALFMGFT PNESASIGII GGADGPTSIF LTMKLAPHLL GAVAVAAYTY MSLVPLIQPP
IMALLTTKKE RLIRMKSLRT VSKSEKLFFA VLVTIVTILL IPDASPLIGM LMLGNFLREC
KVTERLVQAS QNEIINIVTI FLGTSVGLTM QGDRFLQSET LLIILLGIVA FGVATAGGVI
AAKIMNLIWR KNPVNPLIGS AGVSAVPMAA RVSHNVGQKY DPSNYLLMHA MGPNVAGVIG
TAVIAGYYIA TLAK
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