Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0109 |
Symbol | |
ID | 6274940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 137741 |
End bp | 138166 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642612154 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_001876735 |
Protein GI | 187734623 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACC CTTTTACGAT TTCGTTTTTG ATGAAAATGA TTACGGACCG CGTGGATATG ATGCTTACGC GCGGCTTGAC TCTGGAGCGT GTTACGGCCT CCCAGGGCCG GGTGCTGGCT TACCTGATGT CCCGTGACGG AGAAAACGTC TCCCAGAGGG ACATAGAGCG GCATTTGGGA GTCTCCCATA CCACGGCCAA GGGAATTGTC CAGAGGCTGG AACAGAAGGG CTGGGTAACC ACGGCTTTTG ACAGTGAAGA CGGACGGCTG AAGAATGTGT ACCTGACGGA TATGAGCCGG GGAGTTCATG AGTCCATTTG CCAGCAGATA GGAGTGATTG AAAATACGCT GCTGGACGGG GTGCCGGAGG AAAGCCGCAG CATGCTGAGG GATCTGCTCC GGCGCATGTA CGACAATCTC AAATAA
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Protein sequence | MADPFTISFL MKMITDRVDM MLTRGLTLER VTASQGRVLA YLMSRDGENV SQRDIERHLG VSHTTAKGIV QRLEQKGWVT TAFDSEDGRL KNVYLTDMSR GVHESICQQI GVIENTLLDG VPEESRSMLR DLLRRMYDNL K
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