Gene Amuc_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0109 
Symbol 
ID6274940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp137741 
End bp138166 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content55% 
IMG OID642612154 
Producttranscriptional regulator, MarR family 
Protein accessionYP_001876735 
Protein GI187734623 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACC CTTTTACGAT TTCGTTTTTG ATGAAAATGA TTACGGACCG CGTGGATATG 
ATGCTTACGC GCGGCTTGAC TCTGGAGCGT GTTACGGCCT CCCAGGGCCG GGTGCTGGCT
TACCTGATGT CCCGTGACGG AGAAAACGTC TCCCAGAGGG ACATAGAGCG GCATTTGGGA
GTCTCCCATA CCACGGCCAA GGGAATTGTC CAGAGGCTGG AACAGAAGGG CTGGGTAACC
ACGGCTTTTG ACAGTGAAGA CGGACGGCTG AAGAATGTGT ACCTGACGGA TATGAGCCGG
GGAGTTCATG AGTCCATTTG CCAGCAGATA GGAGTGATTG AAAATACGCT GCTGGACGGG
GTGCCGGAGG AAAGCCGCAG CATGCTGAGG GATCTGCTCC GGCGCATGTA CGACAATCTC
AAATAA
 
Protein sequence
MADPFTISFL MKMITDRVDM MLTRGLTLER VTASQGRVLA YLMSRDGENV SQRDIERHLG 
VSHTTAKGIV QRLEQKGWVT TAFDSEDGRL KNVYLTDMSR GVHESICQQI GVIENTLLDG
VPEESRSMLR DLLRRMYDNL K