| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_7036 |
|---|
| Symbol | |
|---|
| ID | 8331257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 8177399 |
|---|
| End bp | 8178796 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644947465 |
|---|
| Product | putative integral membrane protein |
|---|
| Protein accession | YP_003104674 |
|---|
| Protein GI | 256381014 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5650] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGA CACGGGAGGC GGTGGCCCCG CTGGTGGACG CCGGTACGCG CACCCGGCGG
TTCGGCCGCG CGGCGCTGGC CGCGCTGGTC CTCCTGTGCG GCCTGACCCT GCTCGCGGGG
TTCGCCAACA AGGACCGCTG CACCGGCCCC GAGTTCGACC AGTGGGGTCG GACCCAGCCG
GACTACGACG TGCGCAACAA GGAAGAGGTC TGCTACTCCG ACATCCAGCA CCTCTGGATC
GGGCGCGACG TCGACCGGCA CGTCTTCCCC TACGTGCACG GCAGCATCAC CCCCAAGGGC
GTCCTGGTCG GCGGGGTGGT CGAGTACCCG GTGCTGACCG GCCTGCTGAT CTGGGGCGGC
GCGATCTTCG CGCACAACGA CGCCGAGTTC CTGCTGTTCT CCGCGCTGCT GATGGCCCCG
TTCGGGCTGG CCACCGGCTG GCTGCTGGGC AAGCTGGCCC GCTGGCGCGC GCTGCTGTGG
GCGGTCGGCC CGCCGCTCGT GCTGTACGCG TACCACAACT GGGACCTGCC GGTGGTGTTC
TGCGCGGTCG CGGCGGCGTA CGTGGTGCAG CGCGGCTGGG GGCGCAGGGG CGCGGACCGG
CCGCTGCTGG ACCGGGCGCT GGTCGCGTCC GTGCTGCTGG GGCTCGGGTT CGCGTTCAAG
ATCTACCCGG CGATCTTCGT GCTGCCGCTG GCGCTGCACG TGCTGACCGC GCAGCGCGGC
CGGTACGACG TGGTGGGCGC GGTGAAGGTG GCGCTCGCGT CGATCGTGAC GGTCGTGGTG
GTGAACCTGC CGTTCGCGAT CTTCGGCCTG GAGGGCTGGA AGGCGTCGTT CGCGTTCCAG
GGGATGCGGC GGGTGGACAT CACCACCAAC TCCGTCTGGT ACTGGTCGAT GCGCCCGTTC
ATGAGCGACG ACGCGATGCA GGCGATCGTC GGGGTGCTGT CGCCGATGAC GATGCTGATC
TCGTTCGGCC TGGCCTGCTG GATCGGCTGG CTGCGCTTCA CCCGCGAGGG CGTCTACCCG
TGGATCCCGG TCTCGGCGGC GATGCTGTGC GGGTTCCTGC TGCTGCACAA GGTGCACTCG
CCGCAGTACA CGCTGTGGCT GGTGCCGATG CTGGTGCTCA TGCGGGTGCC GCTGACCTGG
ACGTTCGCCT ACTTCGCCGC GGACCTGGCG ATGGGCATCG GGATCTTCCG CTGGTACTAC
GCCATCGAGC AGGGGCAGCC GTCGGGCATC TACGACGGGT TCTCCGCGCA GGCCGTGGTG
ATCGGCGTGT GGGGCCGGGC CGCGCTGCTG GTCGCGCTGT TCTACCTGTT CCTCAAGTCG
GACGTGGTGC CGTCCGCCCG CGAGCGGGTC GCCAACCACC TCGCGCCGTC GCCACCGCCG
TCGCCCGCGC AGACCTGA
|
|---|
| Protein sequence | MSTTREAVAP LVDAGTRTRR FGRAALAALV LLCGLTLLAG FANKDRCTGP EFDQWGRTQP
DYDVRNKEEV CYSDIQHLWI GRDVDRHVFP YVHGSITPKG VLVGGVVEYP VLTGLLIWGG
AIFAHNDAEF LLFSALLMAP FGLATGWLLG KLARWRALLW AVGPPLVLYA YHNWDLPVVF
CAVAAAYVVQ RGWGRRGADR PLLDRALVAS VLLGLGFAFK IYPAIFVLPL ALHVLTAQRG
RYDVVGAVKV ALASIVTVVV VNLPFAIFGL EGWKASFAFQ GMRRVDITTN SVWYWSMRPF
MSDDAMQAIV GVLSPMTMLI SFGLACWIGW LRFTREGVYP WIPVSAAMLC GFLLLHKVHS
PQYTLWLVPM LVLMRVPLTW TFAYFAADLA MGIGIFRWYY AIEQGQPSGI YDGFSAQAVV
IGVWGRAALL VALFYLFLKS DVVPSARERV ANHLAPSPPP SPAQT
|
|---|
| |