| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_7012 |
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| Symbol | |
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| ID | 8331233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 8151683 |
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| End bp | 8152468 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644947441 |
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| Product | HAD-superfamily hydrolase, subfamily IIB |
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| Protein accession | YP_003104650 |
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| Protein GI | 256380990 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00675343 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCGGA CACCTCGCCT GATCGCGCTG GACATCGACG GAACCCTCGT GCCGACCGGG
AGCGACGAGG TCTCGCCCGC CGTCCTGGAC GCGGTCGGGC GGGCGGTCGC GGGCGGGGCG
CGGGTGGTGC TGTCCACCGG GCGGAGCGTG CTCGGGACCC TGGGCGTGGC CGGGCGGCTC
GGGGTGGGCG GGACGCTGCT GTGCTCGAAC GGGGCGGTGT GGTGGGACGT CCGGGCGGGG
GCGGCGGTCC GGCGGTCGGC GTTCGACGCG GCGGCGGCGC TGGCGGTGCT GCGGGAGGCG
CTGCCGGGGG CGGTGTTCGC GAGCGAGGTC GTCGGGGTGG GGAGCCTGGC GCTCGGGCGG
TGGGCCGAGG GGGACCTGTC CGGGGACGTG CGGGAGGTCG GGGTCGGGGA GTTCACCGCG
GAGCCGACGT CGCGGCTGGT CGCGCGGTGG GTGGGGCGGG AGCCGGGGGA GCTGGCGGCG
CGGATGTCCG GGATCAGGCT GCCCGGCGCC ACGTGGACCT CGGACCACGT GGAGGCGTGG
TTGACCGTGG TGCCCGAGGG GGTGTCGAAG GGGGCCGAGC TGGAGCGGTT GCGGCGGGAG
CTCGGGGTCG ACCCGGCGGA CACGGCGGCG ATCGGCGACG GGCACAACGA CGTGGCGATG
CTGCGGTGGG CCGGGTGCGG GGTGGCCATG GGGCAGGCGC CCGAGGAGGT GCGCGCGGCG
GCCGACGTGG TGACCGGGAC GTTGGCGGAG GACGGGGTGG CGGCGGCGCT GGGGCGGTGG
TTCTGA
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| Protein sequence | MERTPRLIAL DIDGTLVPTG SDEVSPAVLD AVGRAVAGGA RVVLSTGRSV LGTLGVAGRL
GVGGTLLCSN GAVWWDVRAG AAVRRSAFDA AAALAVLREA LPGAVFASEV VGVGSLALGR
WAEGDLSGDV REVGVGEFTA EPTSRLVARW VGREPGELAA RMSGIRLPGA TWTSDHVEAW
LTVVPEGVSK GAELERLRRE LGVDPADTAA IGDGHNDVAM LRWAGCGVAM GQAPEEVRAA
ADVVTGTLAE DGVAAALGRW F
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