Gene Amir_6891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6891 
Symbol 
ID8331111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp8026418 
End bp8027008 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content75% 
IMG OID644947322 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003104532 
Protein GI256380872 
COG category[S] Function unknown 
COG ID[COG3226] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCCG CCGCGACACC CAAGGGCGTC CGCCGCCGCC AGGCGCTGGT GGAGGCCGCC 
GCGGAGCTGC TCGTGGAGGG CGGGTTCGCC GCGCTGCGCC ACCGGGCCGT CGCCGAGCGC 
GCCGGCCTGC CGCTGGCCTC CACCACCTAC TACTTCGACT CGATCGACGA CCTGGTCACC 
GCCGCGCTGG AGCACCACGG CGACCTGGAG CTGGCGCGCG GCAAGGCCCG GCTGGACGAG 
CTCGACCCCG ACGACTGCGA CGGCGAGACC GTCACCGACC TCGTCCTGGA GCTCCTGCTC 
GGCCCGCCGG GCGGCGAGCA GGACGCCGAG GCCGTCGTGC TGCGCTACGA GCGCCTCATC 
GCCACCGGCC GCCGCCCCTA CCTGCGCCCG CTCATGCACC GGCAGAAGAG CGCGCTGCAC 
GGCCTCATCC TCGACATCTT CGCCCGAGCG GGCAGGCGGG TCGGGCCCGA GCGCGTCGAG 
GAGCTGATCG CCCTCGTCGA CGGGGCCGTC GTCAACGCCC TCATCGAGGT GAACCCGGAC 
CCCAGGGGCG TCGCCAGGAA GATGCTCTCC CGCGCCCTGC AACCCCGCTG A
 
Protein sequence
MTAAATPKGV RRRQALVEAA AELLVEGGFA ALRHRAVAER AGLPLASTTY YFDSIDDLVT 
AALEHHGDLE LARGKARLDE LDPDDCDGET VTDLVLELLL GPPGGEQDAE AVVLRYERLI 
ATGRRPYLRP LMHRQKSALH GLILDIFARA GRRVGPERVE ELIALVDGAV VNALIEVNPD 
PRGVARKMLS RALQPR