Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6851 |
Symbol | |
ID | 8331071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7987500 |
End bp | 7988507 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644947283 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_003104493 |
Protein GI | 256380833 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.200483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCCCG TTCCGCGCAG CAGCACCCGC GCCCACTGTC CACCCGGCCG GTGGTGGCGG GGCGCGGCGC TCCTGACCCT GCTCGCCGCG TGCACCGGCC CCACCGCGGA GGACCCCCGC CCCACCGGCG CGCTCGCCGA GACCGGCGGT CCGCTGCGGA TCGCCGTCAT CACCCACGGC ACGGCGGGCG ACGCCTTCTG GAACGTGGTC AAGAACGGCG CCACCGACGC GGGCGAGCAG CTCGGCGCCG CCGTCGACTA CAACTCCGAC GGCGACCCCG GCAAGCAGGC CACCCTCGTG GACAACGCGG TCGCGCAGGG CGTCGGCGGC ATCGTCGTGT CGATGGCCAA CCCGGACGCG CTGCGCCCCG CCGTCGAGGG CGCCGTCCGC GCGGGCATCC CGGTGGTCAC CATCAACTCC GGCGGGGCCC GCAGCGCCGA GTTCGGCGCG ATCGCCCACG TCGGCCAAGA GGAGGACCTC GCCGGTGAGG AGGCGGGCAA GCGCCTGAAG GCGGAGGGGA AGTCCAAGCT GCTCTGCGTG ATCCACGAGG CGGGCAACAC CGGCCTCAAC CAGCGCTGCG ACGGGGCCCG CGCGGGCTTC GGGGGTGAGA CCACCACGCT CCAGGTCGAC ATCAACAACC CGACCGACGC GGAGGCCCGG ATCACCGGCG CGCTGCGCAC CGACCCGTCG GTGGACGCCG TGCTGGCGCT CAACTCCCAG GTCGCCGCGA CCGCCGTCAC CGCGGGCAGG TCGGCCGGGT CTAAGGCCGC GGTCGTCACG TTCGACCTCA ACACCGACGT CACCGACGCG ATCAAGGCCG GGGACGTGCT GTTCGCCGTC GACCAGCAGC AGTACGAGCA GGGCTACCTC CCGGTCGTGC TGATCAAGCT CTACCGGGAC AACGCCAACA CCGTCGGCGG CGGCAAGCCC GTCCTCACCG GACCGGGCAT CGTGGACCGC TCCACGGTGG ACCGGGTCGC CGAGTACGCC GAGCGCGGGA CCAGGTGA
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Protein sequence | MTPVPRSSTR AHCPPGRWWR GAALLTLLAA CTGPTAEDPR PTGALAETGG PLRIAVITHG TAGDAFWNVV KNGATDAGEQ LGAAVDYNSD GDPGKQATLV DNAVAQGVGG IVVSMANPDA LRPAVEGAVR AGIPVVTINS GGARSAEFGA IAHVGQEEDL AGEEAGKRLK AEGKSKLLCV IHEAGNTGLN QRCDGARAGF GGETTTLQVD INNPTDAEAR ITGALRTDPS VDAVLALNSQ VAATAVTAGR SAGSKAAVVT FDLNTDVTDA IKAGDVLFAV DQQQYEQGYL PVVLIKLYRD NANTVGGGKP VLTGPGIVDR STVDRVAEYA ERGTR
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