Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6729 |
Symbol | hemC |
ID | 8330945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7862024 |
End bp | 7862965 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644947158 |
Product | porphobilinogen deaminase |
Protein accession | YP_003104372 |
Protein GI | 256380712 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACCGCA CCCTGAGGAT CGGCACCCGA GGAAGCGCGC TGGCGCTGGC GCAGACCGGC ACGGTGGCCG AGGCCCTGCG GGCCGCGGGC GCCCAGGTGG AGATCGTCAC GGTCTCCACG CCCGGTGACC GCTCGCACGC GCCCATCGCG GAGATCGGCA TCGGGGTCTT CACCTCGGCG CTGCGCGACG CGCTCGCGCA CGGCGAGGTC GACGTCGCCG TGCACTCGTA CAAGGACCTG CCCACCGCCC CGGACACCCG GCTGTCGCTG GCCGCGATCC CGCAGCGCGA GGACCCGCGC GACGCGCTGG TCGCCCGCGA CGGGCTGACC CTGGGCGAGC TGCCCCCCGG CTCCAAGGTC GGCACGGGCT CCCCGCGCCG CGCCACGCAG CTGGCGGCGC TCGGCCTCGG TCTGGAGATC CTGCCCATCC GGGGCAACAT CGACAGCCGC ATGGCCCGCG TCTTCGACGG CGAGCTCGAC GCCGTCGTGC TCGCCCGCGC CGGGATCTCC CGGCTCGGCC GGGTCGAGAA CATCACCGAG GTCCTCGACC CGATCCAGAT GCTCCCCGCG CCCGCGCAGG GCGCACTGGC GATCGAGTGC CGGGTCGACG ACGTCGACAC CGAGCACTTG CTCCGCTCCA CGCTCGACGA TTCGGCCAGT CGGGCCGCTG TCACCGCCGA GCGCGCCATG CTGGCCGCGC TCGAAGCCGG GTGCAGCGCG CCGGTCGGCG CACTGGCCGA TGTGGTGGAA GACCTCGACG ACGAGGGAGC CGCGGTCCTC CGCATCTCCC TCCGCGGGGT CGTGGCGGCG GAGGACGGCG ACCTCCTCCG CGCGTCGGCC ACCGGTGACT TGACCGCAGC AGAGGAACTC GGCCGCGCGC TGGCCGCCGA GTTGCTCGAC CTCTCCGGCC ACGCCGCAGC GCGGTCGGCG GGGCGTAGTT GA
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Protein sequence | MNRTLRIGTR GSALALAQTG TVAEALRAAG AQVEIVTVST PGDRSHAPIA EIGIGVFTSA LRDALAHGEV DVAVHSYKDL PTAPDTRLSL AAIPQREDPR DALVARDGLT LGELPPGSKV GTGSPRRATQ LAALGLGLEI LPIRGNIDSR MARVFDGELD AVVLARAGIS RLGRVENITE VLDPIQMLPA PAQGALAIEC RVDDVDTEHL LRSTLDDSAS RAAVTAERAM LAALEAGCSA PVGALADVVE DLDDEGAAVL RISLRGVVAA EDGDLLRASA TGDLTAAEEL GRALAAELLD LSGHAAARSA GRS
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