Gene Amir_6559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6559 
Symbol 
ID8330771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7700887 
End bp7701699 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content77% 
IMG OID644946986 
Productdienelactone hydrolase-like protein 
Protein accessionYP_003104204 
Protein GI256380544 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGGCA ACTCGGCGAA GCAGGTGCTC GACCAGCTCA GCAGGCCAGG GGAGCACGAG 
GTGCTGCGGG GCGACCTGGC CCTCGTCGGG CTTCCCGGCC TGGTCTACAC GCCGGCGTCC
GGCCTCGGCC TGCCCGCCGT CGCGTTCAGC CACGGCTGGC TCCAGCCCGC CACCCGCTAC
CGGGGCCTGC TGCGGCACCT GGCGTCGTGG GGCATCGTCG CGGCGGCCCC GAACACCCAG
CGCGGCCCGC TCGCGTCGGC GCGGCTGATG TCCGCGAACC TGACGACGGC GCTCGACGTG
TGCACGGGCG TGCGGCTGGG CGAGGGCGGC ATCTCGGTCG ACCCGGAGCG GCTGGCGGTG
GCCGGGCACT CGATGGGCGG CGGCGCGGCC GTGCTGGCGG CGGCGCGGGA CCCGAGGGCG
CGGGCGGTGG TGACCCTGGC GGCGGCCGAG ACGAAGCCGT CGGCTCTGGA CGCGGCGCGC
GAGATCGGCG TGCCGGGCCT GCACCTGGCG GGCGGCGAGG ACCGCATCGC GCCGCCGATC
GGGCACGCGC AGGCGATCGC GGAGGCGTGG CGCGGGCCGG TGCAGGTGCG GATGCTGGAG
AAGGCCTCGC ACCTGGGGTT CACCGAGGGC AGGCACTGGA GCGAGCTGCT GCTGGACGGC
AGGGGCGAGC GCTCGGCGCA GCGGCTGGCG CGCGGCCTGG TGACGGCGTT CCTGCTGCGG
GTGCTCAAGG GCGAGCGGCG CTGGGACGCG CTGCTGGAGG ACGACGTGCG CGGCGCGGCG
CTGGTGTACC AGCGGGCGGC GCTGGGGCTG TGA
 
Protein sequence
MSGNSAKQVL DQLSRPGEHE VLRGDLALVG LPGLVYTPAS GLGLPAVAFS HGWLQPATRY 
RGLLRHLASW GIVAAAPNTQ RGPLASARLM SANLTTALDV CTGVRLGEGG ISVDPERLAV
AGHSMGGGAA VLAAARDPRA RAVVTLAAAE TKPSALDAAR EIGVPGLHLA GGEDRIAPPI
GHAQAIAEAW RGPVQVRMLE KASHLGFTEG RHWSELLLDG RGERSAQRLA RGLVTAFLLR
VLKGERRWDA LLEDDVRGAA LVYQRAALGL