Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6398 |
Symbol | |
ID | 8330609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 7492151 |
End bp | 7493026 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 644946826 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
Protein accession | YP_003104045 |
Protein GI | 256380385 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGCGC CGACGCTGCT GCTGCTCGAC CTGGACGGCG TGCTGCGCCG GTTCGGGTCG GACGCGCCGA TCGAGGACGC GCACGGGTTG CGGCGCGGGC TGCTCGCGGA GACCGCTCAT TCGCTGATCG GGCCCGCGCT GGTCGGGGCC GAGACGGACG CGTGGTGGCG GGACGCCGTG GTGGGCGCGC TGGTGGCCCA GGGGGTCGAC GGCGAGGTCG CGGCCTCGGC GGTGCGGGCG TGGAGCCGGG TCGGCGAGGT CGTGCCCGAG GCGCTGGAGC TGGTGCGGGC GGTGCGCGGG CGGTGCCGGG TGGCGCTGCT GACCAACGCC ACCGACCGGG TCGGCGCGGA CCTGGCGTCG CTCGGGCTGG ACCGCGAGGT CGACGCGGTG GTCCCGTCCG CGCGGCTGGG AGTGGCCAAA CCGGACCCCG AGGCGTTCCG GCGGGCGCTG CGGGTGCTCC AGCACTCGCC GTCGGCGACG CTGTTCTGCG ACGACTCGGC GGGCCACGTC GAGGGCGCCC GCGCGGCCGG GCTGGACGCC GCGCACACCC CGGACGCCGC CGCGCTGCGG GACGCGCTGG TCTCGCGCGG GCTGCTGGAG GCCGGGGCGG ACGCGGGCGC GGAGAGCTCT GTGGACGGAC CGGTGCTGCT GGTGCTGCAC GACCGGGACG AGGCCGAGGA GGTCGCCGCC GAGCTGCTGG CGGCGGGCTG GGCGCCGTGC CTGGTGCACA AGGAGCTGCT CGCGGGCGAG GACGACGCCG AGGACGCGGA CTGGGTGGTG GAGGTCGGGT CCGGTCCGGA CGGTCGGGCG GCGGACGTCC ACCGGCCGTT CCTCGACGCG CTGGCTGAGC GCCACGAGGG GTTCACCACC GACTAG
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Protein sequence | MSAPTLLLLD LDGVLRRFGS DAPIEDAHGL RRGLLAETAH SLIGPALVGA ETDAWWRDAV VGALVAQGVD GEVAASAVRA WSRVGEVVPE ALELVRAVRG RCRVALLTNA TDRVGADLAS LGLDREVDAV VPSARLGVAK PDPEAFRRAL RVLQHSPSAT LFCDDSAGHV EGARAAGLDA AHTPDAAALR DALVSRGLLE AGADAGAESS VDGPVLLVLH DRDEAEEVAA ELLAAGWAPC LVHKELLAGE DDAEDADWVV EVGSGPDGRA ADVHRPFLDA LAERHEGFTT D
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