Gene Amir_6209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6209 
Symbol 
ID8330420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7276424 
End bp7277455 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content76% 
IMG OID644946641 
Producthistidine kinase 
Protein accessionYP_003103860 
Protein GI256380200 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGGGC GGGAACGGGC TCGGGCGCTG CTGGACCGGG TGCCCCGCCC GCTCGACCCG 
ATGCGGTCCA TCAAGTTGAA GATCGCCGCC GTGGTGCTGG TGTCCTGGGC CGCCGCGTTC
ACGTTCTTCC GCATCCGCAT CGGCTGGCTC GCGCCGACCA CGGTGTTCGG CGCTCTCGGC
ATCGCGCTGG TCATCTCGCA GGTCGTCGGC CACGGCATGA CCCGCCCGCT GCGCGAGATG
ACCTGGGCCG TCGGCGCGAT GCGGCGCGGC GACTACAGCC GCCGGGTGCG GGCGACCGGG
CGGGACGAGG TGGGGCAGCT CGCGGTCGCG TTCAACGAGA TGGCGGCGGA CATCGCGGAC
GCCGAGCAGC GCCGCCGCGA GCTGATCGCG AACGTCTCCC ACGAGCTGCG CACCCCCATC
ACCGCGCTCC AGGCCGTGCT GGAGAACGTG GTGGACGGGG TCGAGCAGGC CGACGCCACC
ACGATGCGCA CCGCGCTCGC CCAGACCGAG CGGCTCGGGC GGCTGGTCGC GGAGCTGCTG
GACCTGTCCC GCATCGACGC GGGCGCGCAC CGGCTCGACC TGTCCGAGGT GGACGTCCCC
GAACTGCTCG GCTCCGCCGT CGCCGAGGCC GCGGTGGCGG CGCCGTCGAC CCGGTTCGCC
GTCGACGCGC CGCCGGGGAC GGCGGTCACC GCCGACCGCG CCCGGCTGCA CCAGGTCGTG
CAGAACCTGC TGGACAACGC CACCCGGCAC GCCCCGCCCG GCGGCGAGGT GCGGATCACC
GCCCGCGCGG TCGGCGAGGT GTTCGCGCTC GCCGTCGAGG ACGATGGCCC CGGCATCGCC
GAGTCCGACC GGGAACGGGT GTTCGAGCGG TTCACCAGGG GCGAGCGGGC CAGCGGCGGC
GGCACCGGGC TGGGGCTCGA CATCGCGCGG TGGGTGGTCG ACCTGCACGG CGGCGCGATC
CGGGTGGTCG ACGCGCCCGG CTGCCGCATC GAGGTGACCC TCCCCCGGCA CGGGCGACCG
CCCACCGGCT GA
 
Protein sequence
MTGRERARAL LDRVPRPLDP MRSIKLKIAA VVLVSWAAAF TFFRIRIGWL APTTVFGALG 
IALVISQVVG HGMTRPLREM TWAVGAMRRG DYSRRVRATG RDEVGQLAVA FNEMAADIAD
AEQRRRELIA NVSHELRTPI TALQAVLENV VDGVEQADAT TMRTALAQTE RLGRLVAELL
DLSRIDAGAH RLDLSEVDVP ELLGSAVAEA AVAAPSTRFA VDAPPGTAVT ADRARLHQVV
QNLLDNATRH APPGGEVRIT ARAVGEVFAL AVEDDGPGIA ESDRERVFER FTRGERASGG
GTGLGLDIAR WVVDLHGGAI RVVDAPGCRI EVTLPRHGRP PTG