Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6163 |
Symbol | |
ID | 8330374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7222001 |
End bp | 7223782 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644946597 |
Product | protein of unknown function DUF262 |
Protein accession | YP_003103816 |
Protein GI | 256380156 |
COG category | [S] Function unknown |
COG ID | [COG3472] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGGGTCG AGAGCTTCGG CATCGAGAAG GAGTTCCTGA AGGACCTGCT CACCCAGGTG GACAAGGGAG AAGCGCAGCT CCCGGAGTTC CAGCGCGGTT GGGTGTGGCC GGACCGCAAC ATCGCGAGCC TGATCACCTC CATCTCGCTG GGCTACCCGG CAGGCACCGC GATGATGCTG AAGCAAGGTG GCGACGTCCG CTTCAAGACC CGGTCGGTCG AGGGCGCGCC GCGCAGCAAC GTCGTGCCGG ACCGGCTGAT CCTCGACGGG CAGCAGCGGC TGACCTCGCT CTACCAGTCC CTGTTCCGCG ACGCGCCCGT GGAGACCCAC GACGTCCGCA ACAAGACCGC TCGCGGCTGG TTCTACCTCG ACATGGAGAA AGCGCTCCTC GGCGACGGCG ATCGCGAGGA AGCCGTGGTC TTCATCCCGG AGAGCAAGGT GCGCCTGGAC TTCCGCGGTC AGGCCCTGCT GAACCTGTCC ACGCCTGAGC ACGAGTACGC GCACCGCATG TTCCCCTGCG CCTCGGTGTT CAACTCGATG CCCTGGATGA TGGGGTTCGT CCAGCACGAG CCGGAGCGGC AGGCCGAGAA CCTGAAGCTG TGGGGCGAGT TCCACGAGGC CGTGATCAAG AGGTTCGAGC AGTACCAGCT CCCGGTGCTC GAACTGGGCA AGAGCACTCC CCGGCAGGCG GTGTGCCAGG TCTTCGAGAA GGTCAACACC GGTGGGGTCA CCCTGACCGT CTTCGAACTG CTGACCGCGA CCTTCGCGGC CGACGACTTC GACCTGCGGC GCGACTGGAC GGGGCGTGAA GAGCAGTGGG CGGGCAGCCA GTACCGGGTC CTCTCCGAGG TCGCCAACAC GGACTTCCTC CAGGCGGTGA CCCTGCTCGC CACGTACGAG CGCCACCAGG CCGCCATCGA GGCGGGCCGG GACGAGCTGG CTGCTCCGCG CATCGGCTGC CGCCGAGTCG ACATGCTCAA CCTGACCCTG CCGGAGTACC GCAAGTGGGC TCCCGAGGTC GCGGACGGCC TCAAGTCGGC GGCCCAGTTC CTGTACTCGC AGCACATCTT CGACACCCGG TTCCTGCCCT ACGGCAGCCA GCTCATCCCG CTGTCGGCGA TCTTCACCCT GCTCGGCCCG AAGGCGAAGA CGGTCGGCGC GGTGCGGAAG ATCTCCCGCT GGTACTGGTC CGGTGTCTTC GGCGAGCTCT ACGGCGGCAC GATCGAGACC CGCTTCGCGC GCGACGTGCC CGAGGTCGTC GCCTGGGTGA CGGGGCAGGG GGACGAACCG CGCACGGTCC AGGAGGCGCA GTTCTTCTCC AGTCGCCTCA ACTCCCTGCG AACCCGTGGT TCCGCGGCTT ACAAGGGGCT CTACGCGCTG CTGCTCAAGG AGGCGCCGGT GGACTGGTGC ACCGGTTCCG ACATGTCCAT CGAGAACTAC TTCGACAACG CCGTCGACAT CCACCACGTG TTTCCCAGGG CCTGGTGCGA GAAGCAGGGG ATCTCCCAGG CCAGGTACAA CTCCATCCTC AACAAGACCC CGCTGACCGC GCGCACCAAC CGCCTCATCG GTGGTCGGGC GCCGTCGGCG TACCTGCGGG TGCTGGTCAA CAAGGCGGAG ACCAGCCCGG AGCAGGTCGA CCGGAACGTG CGTTCGCACC TGATCGCGGT GGCGCACCTG CACGGTGACG ACTTCACCGC GGCGATGGAG GCCCGACGAC GCGCCCTGCT CGACCTCGTC GGGCGGGCGA TGGGCAAGGA CGCGCGCATC GACACCGAGT AG
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Protein sequence | MGVESFGIEK EFLKDLLTQV DKGEAQLPEF QRGWVWPDRN IASLITSISL GYPAGTAMML KQGGDVRFKT RSVEGAPRSN VVPDRLILDG QQRLTSLYQS LFRDAPVETH DVRNKTARGW FYLDMEKALL GDGDREEAVV FIPESKVRLD FRGQALLNLS TPEHEYAHRM FPCASVFNSM PWMMGFVQHE PERQAENLKL WGEFHEAVIK RFEQYQLPVL ELGKSTPRQA VCQVFEKVNT GGVTLTVFEL LTATFAADDF DLRRDWTGRE EQWAGSQYRV LSEVANTDFL QAVTLLATYE RHQAAIEAGR DELAAPRIGC RRVDMLNLTL PEYRKWAPEV ADGLKSAAQF LYSQHIFDTR FLPYGSQLIP LSAIFTLLGP KAKTVGAVRK ISRWYWSGVF GELYGGTIET RFARDVPEVV AWVTGQGDEP RTVQEAQFFS SRLNSLRTRG SAAYKGLYAL LLKEAPVDWC TGSDMSIENY FDNAVDIHHV FPRAWCEKQG ISQARYNSIL NKTPLTARTN RLIGGRAPSA YLRVLVNKAE TSPEQVDRNV RSHLIAVAHL HGDDFTAAME ARRRALLDLV GRAMGKDARI DTE
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