Gene Amir_6014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6014 
Symbol 
ID8330224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp7060690 
End bp7061727 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content73% 
IMG OID644946447 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_003103667 
Protein GI256380007 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.312267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCTCG CAGTGATCCC GGGGGACGGG ATCGGGCCCG AGGTCGTCGC CGAGGCACTG 
AAGGTGCTGG GTGAGGTCGT TCCGGCGGCC GAGATCACCC GTTACGACCT CGGTGCGGCG 
CGCTGGCACG CCACAGGTGA GTTGTTGCCG GAGTCCGTGC TGGGGGAGCT GCGCCAGCAC 
GACGCGATCC TGCTCGGCGC CGTCGGCGAC CCGTCGGTGC CCAGCGGCAT CCTGGAGCGC 
GGCCTGCTGC TGCGCCTCCG GTTCGAGCTC GACCACCACG TCAACCTGCG CCCGGCGCGG 
TTGTACCCCG GCGTCCGCAG CCCCATCGCG GACCCGCCGG AGATCGACAT GGTGGTCGTC 
CGCGAGGGCA CCGAGGGCCT GTACGCGGGC AACGGCGGCC TGCTGCGCAA GGACACCCCG 
CACGAGATCG CCACCGAGGT GTCCATCAAC ACCTCGTTCG GCGTCGAGCG GGTCGTCCGG 
GACGCCTTCG CGCGCGCCGC GAACCGGCCC CGCAAGCACC TGACCCTGGT GCACAAGACG 
AACGTCCTCA CCCACGCGGG CTCCCTGTGG TCCAGGGTGG TCGAGGAGGT CTCGCTCCAG 
CACCCCGACG TCACCGTCGC CTACCAGCAC GTGGACGCCG CGACGATCCA CCTGGTCACC 
GACCCCGGCC GCTACGACGT GATCGTCACC GACAACCTGT TCGGCGACAT CCTCACCGAC 
CTGGCGGCGG CGGTGACCGG CGGCATCGGG CTGGCCGCGT CCGGCAACCT GGACGTGACC 
AGGCGCAACC CGAGCATGTT CGAGCCGGTG CACGGCAGCG CGCCGGACAT CGCGGGCCAG 
GGCGTGGCCG ACCCGACCGC CGCGGTGCTG TCCGTGGCGC TCATGCTCGA CCACCTCGGC 
GAGCACGAGT CGGCCCGCCG CATCGAGGCG TCGGTGGCGT TCGACCTGGC CACCCGCGAC 
CACGCGTCGC CGGGCGCGAC CTACGCGATC GGCGACCGGC TCGCCGCGCT GGTGTCGTCC 
AACGTGCGCA CCGGCTGA
 
Protein sequence
MRLAVIPGDG IGPEVVAEAL KVLGEVVPAA EITRYDLGAA RWHATGELLP ESVLGELRQH 
DAILLGAVGD PSVPSGILER GLLLRLRFEL DHHVNLRPAR LYPGVRSPIA DPPEIDMVVV 
REGTEGLYAG NGGLLRKDTP HEIATEVSIN TSFGVERVVR DAFARAANRP RKHLTLVHKT 
NVLTHAGSLW SRVVEEVSLQ HPDVTVAYQH VDAATIHLVT DPGRYDVIVT DNLFGDILTD 
LAAAVTGGIG LAASGNLDVT RRNPSMFEPV HGSAPDIAGQ GVADPTAAVL SVALMLDHLG 
EHESARRIEA SVAFDLATRD HASPGATYAI GDRLAALVSS NVRTG