Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5956 |
Symbol | |
ID | 8330163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 7002996 |
End bp | 7003676 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644946387 |
Product | SCP-like extracellular |
Protein accession | YP_003103610 |
Protein GI | 256379950 |
COG category | [S] Function unknown |
COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGATAC GGTGCGCGAC CGTGAGCGCG CGGAGCGGGA AGAGGTCCGC CATCGGCGGG CTCCTCGGCC TGCTGCTCGG CGCGGCGGGC GTCGGCTCCA TCGCCCTCCT CGTCGGCCCG ACCGCCTCGA CGTCGTCCCA GCAGGACCCG CCGCCGGGCG CGCCCCGGTC CGGTCCCGGT CCGGGCCCCG GTCCCTCAGG GGCTCCCGGC GGGCCCTGGC CGACCACCGC CACGACCAGC GGGCTTGCCC CGGACTCCCC CGCACCGGCA AGCTCGTCGC CGACGTTCCC TCAGGACCCG CCGCCGCTGG ACGTGGTGCA GGCCGACCGG GTCGTGCGGC TGGTCAACCA GGCGCGCGGC GCGGCGGGGT GCGCGGCGCT GGGCGTGGAC GACCGGGTGG TCACCGCCGC CAGGGCGCAC AGCGCGGACA TGGCGAGCCG GGGCTACTTC GCGCACACCA GTCCGGAGGG TGTGGACTTC GCCACCCGGA TGCGCGAAGC GGGCCATCCG CGACCCGCCG GTGAGAACAT CGCCATGGGC CAGCGGAGCG CGGAGGACGT CGTGGGCGCG TGGTTGGACT CCGAGGGTCA CCGTCGGAAC ATCCTCGACT GCTCGTTCAC CACCACCGGT GTCGGTCTGG ACACCCGTGG CTGGTACTGG ACCCAGAACT TCGGCCGTTG A
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Protein sequence | MVIRCATVSA RSGKRSAIGG LLGLLLGAAG VGSIALLVGP TASTSSQQDP PPGAPRSGPG PGPGPSGAPG GPWPTTATTS GLAPDSPAPA SSSPTFPQDP PPLDVVQADR VVRLVNQARG AAGCAALGVD DRVVTAARAH SADMASRGYF AHTSPEGVDF ATRMREAGHP RPAGENIAMG QRSAEDVVGA WLDSEGHRRN ILDCSFTTTG VGLDTRGWYW TQNFGR
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