Gene Amir_5863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5863 
Symbol 
ID8330070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp6904272 
End bp6904940 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content78% 
IMG OID644946295 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003103518 
Protein GI256379858 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGTTG ACGACCGCCC CTACCACCAC GGGAGGCTCC GCGAGGCCCT GCTCGACGCC 
GCCTGGCGCA GCGTGCGGGA GCACGGCGCG GAGCAGCTCT CGCTCCGCGA GCTGGCCAGG 
GAGGTCGGGG TCAGCCACGC CGCGCCGCGC AGGCACTTCC CCGACCGGCA GGCCCTGCTC 
GACGCGCTCG CGATCGCCGG GTTCGAGCGG ATGGACGTCG AACTGCGCAC CGCCGTGGCG 
GGCGCGGGCG CGGACTACCG GGACCGGCTG GTCGCCGCCA CGCGCGCCTA CTTCCGGTTC 
GCGGTGGACG ACCCGGCGCT GCTGGAGCTG ATGTACACCG GCAAGCACCG GCCGGGCGCG 
GACGCGGTCG TCGCCGCCGT GGCGGCCCCG CTGGGACTGC TGGAGGCGAT GCTCGCCGAG 
GGGCGGGAGC GGGGCGAGCT GGGCGACGGG GACCCGGAGC GGATCGGCGT GCTGATGTTC 
GCGACCGTGC ACGGGCTCGC CGCCATGGTG AAGGGCCGGA TGGTCGACCG GGAGGTCGCG 
GGCGGGCTGG TGGACGACGC GGTGGTGCGG TTCCTCACCG GCGGCGTCCC GAGCGCGGCG 
GGCGCACCCG GCGCGGCGGA CGCCCAGGGC GCGGCGGGTG GCGCGCTGTG GACCTGCCCC 
CGGCCCTGA
 
Protein sequence
MTVDDRPYHH GRLREALLDA AWRSVREHGA EQLSLRELAR EVGVSHAAPR RHFPDRQALL 
DALAIAGFER MDVELRTAVA GAGADYRDRL VAATRAYFRF AVDDPALLEL MYTGKHRPGA 
DAVVAAVAAP LGLLEAMLAE GRERGELGDG DPERIGVLMF ATVHGLAAMV KGRMVDREVA 
GGLVDDAVVR FLTGGVPSAA GAPGAADAQG AAGGALWTCP RP