Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5747 |
Symbol | |
ID | 8329954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 6775589 |
End bp | 6776353 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644946184 |
Product | lipoprotein signal peptidase |
Protein accession | YP_003103407 |
Protein GI | 256379747 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0597] Lipoprotein signal peptidase |
TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGACA ATGGCCGGGT GAGCACGGAC CCCAACACCG AACCCGACGC CCCAGACGAG GTCGCCTCGC CCGCGCCGGA GCCCCAGCCC CAGCGGCGGG TCGTGCTGCT CGGCGTGATC GCCGCCGTCG TGCTGGCCCT GGACATCGCC ACCAAGGTGG TCGCGGTCGC CGAGCTGGAG GGCAGGCAGC CGGTCGAGCT GTTCGGCGGG CTGCTCTACC TGCCGCTGAT CCGCAACCCC GGAGCCGCGT TCGGCATGGC CGAGGGCTGG ACGATCGTCC TGGCGATCAT CGCGTTCGGC GTCGTCGGGT TCATCCTGTG GATCGCCCGC AAGCTCCGCT CGGTCGGCTG GGCCATCGGC CTCGGCCTGG TGCTGGGCGG CGCGCTCGGC AACCTGGCCG ACCGGATCTT CCGCTCGCCC GGCCCGCTGC GCGGCCACGT CGTGGACTTC CTGTCCGTGC TGGACCCGTG GGGCGGCTTC TTCCCCGTGT TCAACCTGGC CGACTCGGCC ATCTGCGTCG GCGGCGGCGT GATCGTGCTG ATGTCGCTGC TCCAGCGCGA CTACGACGGC ACCCGCTTCG AGAAGAAGCC CTCCGGCAAG ACCGCCACCG CGGCGGGCAC CACTACAGCG GGCACCACTA CAGCGGGCAC CACTACAGCG GGCACCTCTA CAGCGAGCAC CACCGCGGCG AGCACCACCC CCAAGACCAC CGAGAACCAG ACCGCAGGCG AGACCGCCGA CGGCGGGAAG CAGGAACAGG CGTGA
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Protein sequence | MLDNGRVSTD PNTEPDAPDE VASPAPEPQP QRRVVLLGVI AAVVLALDIA TKVVAVAELE GRQPVELFGG LLYLPLIRNP GAAFGMAEGW TIVLAIIAFG VVGFILWIAR KLRSVGWAIG LGLVLGGALG NLADRIFRSP GPLRGHVVDF LSVLDPWGGF FPVFNLADSA ICVGGGVIVL MSLLQRDYDG TRFEKKPSGK TATAAGTTTA GTTTAGTTTA GTSTASTTAA STTPKTTENQ TAGETADGGK QEQA
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