Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5692 |
Symbol | |
ID | 8329899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 6716066 |
End bp | 6717568 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644946130 |
Product | glutamate synthase, NADH/NADPH, small subunit |
Protein accession | YP_003103353 |
Protein GI | 256379693 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTGATC CCCAGGGCTT TCTCAAGCAC ACCCGCGCCG AGGCGAAGAA GCGGCCCGCG ACCGAGCGCG CCGCCGACTG GGACGAGGTG TACCTCGACC AGGGGCCGGA GGTCCGGGAG GCGCAGGTCC GCGTCCAGGC CACCCGGTGC ATGGACTGCG GCGTCCCGTT CTGCCACTCC GGCAGCGCGG GCTGCCCGCT CGGCAACCTG ATCCCCGAGT GGAACGACCT GGTCCGCCGG GGCGACTGGG AGTCCGCGTC GCACCGGTTG CACGCGACCA ACAACTTCCC GGAGTTCACC GGCAGGCTGT GCCCGGCGCC GTGCGAGGCG GCGTGCGTGC TCGCCATCAC CCCCGACGCC GGGGGAGCGG TGGCGATCAA GCGGGTCGAG CAGGCCATCG CCGACACCGC GTGGGAGAAC GGCTCGGTCA AGGCCAGCCA GTCCCAGGTG TCCTCGGGCA AGAAGGTCGC CATCGTCGGC TCCGGCCCCG CCGGGCTGGC CGCCGCCCAG CAGCTCACCC GCGCCGGGCA CGAGGTCACC GTGTACGAGC GGGACGACCG GCTCGGCGGG CTGCTGCGGT ACGGCATCCC CGAGTTCAAG ATGGAGAAGA AGGTCCTCGA CCGGCGCCTC GCGCAGCTGC GCAAGGAGGG CACGAGGTTC GTGACCGGCT GCGAGGTCGG CGTCGACCTG ACCGTGGAGG AGCTGCGCGC GTCGTTCGAC GCCGTGGTGC TCGCGGTCGG CGCGCTGCGC GGTCGCGACG ACACGACCAC GCCCGGCCGC TCGCTCGACG GCGTCCACCT GGCGATGGAG CACCTGGTGC CCGCCAACCG CGCGTGCGAG GGCGACGGGG CCCCCGCGAT CAGCGCGGCG GGCAAGCACG TGGTGGTCAT CGGCGGCGGC GACACCGGCG CGGACTGCTA CGGCACGGCC GTGCGGCAGG GCGCGCTGTC GGTGACGCAG CTCGACCAGT ACCCGCAGCC CCCGTCGCAG CGCGACGACG CGCGGTCCCC GTGGCCGGTG TGGCCGTGGA TCCTGCGCAC CTACGCGGCG CACGAGGAGG GCGGCGAGCG GCGGTTCGCC GTGGCCGTCG AGGAGTTCAC CGGCGAGGAC GGGCGCGTCA CGGCGGTCAA GCTGCGCAAG GTGAAGGTGC AGCGGGACTC CACCGGCAGG CGCGTGGTGG TGCCGATGTC CGAGGAGTTC GAGGAGCTGC CCGCCGACCT GGTGCTGCTC GCGATCGGCT TCGAGGGCGT CGAGCAGATG CCGCTGCTGG ACGGGCTCGG GATCTCCCTG AGCGCCCGCA GCACGATCTC GTGCGGTTCG GACTGGCAGA CCAGCGCGCC CGGCGTGTTC GTCTGCGGCG ACGCGCACCG AGGCGCGTCC CTGGTGGTGT GGGCGATCGC GGAGGGCCGC TCGGTGGCCA ACGCGGTCGA CCGCCACCTG ACCGGCTCGT CCGACCTGCC GTCCCCGGTG ATCCCGAACC AGCTGCCGCT GGCCGTGGTC TGA
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Protein sequence | MADPQGFLKH TRAEAKKRPA TERAADWDEV YLDQGPEVRE AQVRVQATRC MDCGVPFCHS GSAGCPLGNL IPEWNDLVRR GDWESASHRL HATNNFPEFT GRLCPAPCEA ACVLAITPDA GGAVAIKRVE QAIADTAWEN GSVKASQSQV SSGKKVAIVG SGPAGLAAAQ QLTRAGHEVT VYERDDRLGG LLRYGIPEFK MEKKVLDRRL AQLRKEGTRF VTGCEVGVDL TVEELRASFD AVVLAVGALR GRDDTTTPGR SLDGVHLAME HLVPANRACE GDGAPAISAA GKHVVVIGGG DTGADCYGTA VRQGALSVTQ LDQYPQPPSQ RDDARSPWPV WPWILRTYAA HEEGGERRFA VAVEEFTGED GRVTAVKLRK VKVQRDSTGR RVVVPMSEEF EELPADLVLL AIGFEGVEQM PLLDGLGISL SARSTISCGS DWQTSAPGVF VCGDAHRGAS LVVWAIAEGR SVANAVDRHL TGSSDLPSPV IPNQLPLAVV
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