| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5548 |
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| Symbol | |
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| ID | 8329754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6587522 |
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| End bp | 6588352 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644945988 |
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| Product | pentapeptide repeat protein |
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| Protein accession | YP_003103212 |
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| Protein GI | 256379552 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1357] Uncharacterized low-complexity proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.262169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCGAAC CGCCCCGCGA GTGGCAACCG CTGCGCGCCG ACTGCTCGCG CTGCGCCGGC
CTGTGCTGCG TGGTGCCCGA GTTCGCCGCG TCCTCGGACT TCGCGATCAC CAAACCGGCC
CGCACTCCGT GTCCCAACCT GGGCCCGGAC TTCCGCTGCG GCATCCACAC GCGCCTGCGC
GCCACCGGTT TCACCGGCTG CACGGTGTAC GACTGCTTCG GCGCGGGCCA GCACGTCACG
CAGGTCGTGT TCAACGGCCG CGACTGGACC GACCCCGAGG TCGCAGGCCG CCTGTTCGAG
GTGTTCCCGG TGGTGCGGAC GCTGCACGAG GTCCTGAACT ACCTGGTCGA AGCCGCCGCG
CGCCTCCCCG AAGGCGGCCT GCGCGCGGAG GTCGTCGAGG CCCGCAGGGA CCTGGAGACC
CTGCTGTCCC AGGGCCCCGA CGTCCTGCGG CGCACCAACC CGGAAGCCCG CCGCCGCGAG
GTGAACACCC TCCTGCTGCG CGCCAGCGAG TCCCTCCGGG CCCCGGCGTC CCGCAGACCG
GACCACCGCG GCGCGGACCT GATCGGCCGC TCGTTCGCCG GAGCCGACCT GCGCGGCGCG
TCACTGCGCG GGGCCCTGCT GATCGGCGCC GACCTGCGCG GGGCGGACCT GCGCGGCGCG
GACCTCATCG GCGCGGACCT GCGAGGCGCG GACCTGCGCG GAACCGACCT GCGCGAAGCC
CTGTTCCTGG TCCAGTCCCA ACTGGACGCG GCCAAGGGCG ACCGCACCAC CACCCTCAGC
GCACCCCTGA CCCACTCCCA GCACTGGCCC GCAGCCCTCA CCCGCAGCTG A
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| Protein sequence | MLEPPREWQP LRADCSRCAG LCCVVPEFAA SSDFAITKPA RTPCPNLGPD FRCGIHTRLR
ATGFTGCTVY DCFGAGQHVT QVVFNGRDWT DPEVAGRLFE VFPVVRTLHE VLNYLVEAAA
RLPEGGLRAE VVEARRDLET LLSQGPDVLR RTNPEARRRE VNTLLLRASE SLRAPASRRP
DHRGADLIGR SFAGADLRGA SLRGALLIGA DLRGADLRGA DLIGADLRGA DLRGTDLREA
LFLVQSQLDA AKGDRTTTLS APLTHSQHWP AALTRS
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