| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5540 |
|---|
| Symbol | |
|---|
| ID | 8329746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 6577885 |
|---|
| End bp | 6578487 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644945980 |
|---|
| Product | response regulator receiver and ANTAR domain protein |
|---|
| Protein accession | YP_003103204 |
|---|
| Protein GI | 256379544 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3707] Response regulator with putative antiterminator output domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCCAGG CTGCCGAGGC CCAGTCCCAG GCCGCGCCGC GCCGCGTGCT CGTGGCCGAG
GACGAGGCCC TGATCCGGCT CGACCTGGTC GAGATGCTCC GCGAGGAGGG CTACGAGGTG
GCCGGTCAGG CCGCCGACGG CGACGAGGCG ATCACGCTGG CCAAGGAGCT CCGCCCCGAC
CTGGTCATCC TCGACGTGAA GATGCCCAAG GTCGACGGCA TCGAGGCCGC GTCGGTCATC
GCGGGCGAGC GGGTGGCCCC CGTCGTCATA CTGACCGCCT TCAGCCAGCG CGACCTGGTC
GAGCGGGCCC GCGACGCGGG CGCCATGGCC TACCTGGTCA AGCCCTTCGC CAAGCGCGAC
CTGGTGCCCG CGATCGAGCT GGCCATGAGC CGGTTCTCCG AGCTCCAGGC GCTGGAGCTG
GAGGTCGCGG GCCTCAACGA GCGCCTGGAG ACCCGCAAGG TCGTCGAGCG CGCCAAGGGC
CTGCTGATGA CCAAGCAGAA CCTGAGCGAG CCCGAGGCCT TCCGCTGGGT CCAGCGCACC
GCCATGGACC GCCGCACCAC CATGAAGGCC GTGGCCGAGG CCGTCATCGA AAACTTCGGC
TGA
|
|---|
| Protein sequence | MTQAAEAQSQ AAPRRVLVAE DEALIRLDLV EMLREEGYEV AGQAADGDEA ITLAKELRPD
LVILDVKMPK VDGIEAASVI AGERVAPVVI LTAFSQRDLV ERARDAGAMA YLVKPFAKRD
LVPAIELAMS RFSELQALEL EVAGLNERLE TRKVVERAKG LLMTKQNLSE PEAFRWVQRT
AMDRRTTMKA VAEAVIENFG
|
|---|
| |