| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5539 |
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| Symbol | |
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| ID | 8329745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6576393 |
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| End bp | 6577571 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644945979 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_003103203 |
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| Protein GI | 256379543 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCAGGAG CACGACTCGG CCGAGTGCTG GCGCTCGCAG CGGCGTCCTC GCTGGTGCTC
GCGGCATGCG CGGGCGGCGG CGGCGGCAGC AGCACGGGCA GTGGCGACGG CAGCACGGTC
AAGATCGGGT TCATGGGTGA CCTCACCGGT GAGAACTCGG CGATCGTGAT CCCGCCGCGC
AACGGCGCGA AGCTGGCGTT CGACGAGTAC AACGCCAAGA ACCCCAAGGT GAAGATCGAG
CTCGTCGAGT ACGACAGCCA GGGCAAGCCC GAGCAGGCCA CCTCGCTCAT CACGAAGGCC
GTCGGTTCGG ACAAGATCTC GGCCCTGATC GGCCCGGCCT TCTCCGGCGA GTCCAAGGCG
ATCGGCGGTG TGCTGGACCA GAACAAGATC CCCAGCATCT CCCCCTCCGC CACCAACCCC
GGCCTGGCCG CCAACGGCTG GTCGTTCTGG CACCGCGTCG TGGCGAACGA CGACGACCAG
GGCCCCGGCA TCGCGGACTT CCTGGTGAAG GCGAAGAGCC CGAAGAAGGC GTTCGTGCTC
TCCGACGACC AGGAGTACAG CACCGGTCTG GCGGACGCCG TCGCGAAGGC GTTCGAGGGC
GCGGGCGTCG CGGTCGAGAA GGACCGCTTC TCCAAGGACG CCTCGGACTA CTCGTCCGTG
GTCACCAAGG TCGCCTCGGC CAACCCCGAC GTGATCGTCT ACGGCGGCTA CTACGCGCAG
GCCGGTCGTC TGCTCAAGCA GCTGCGCGAC AGCAACGTCA CCGCGCCGTT CGCCTCCGGT
GACGGCTCGC TCGACGCGCA GCTCGTCTCC GCCGCGGGCG CCCAGGCCGC CGAGGGCGCG
ATCCTCGCCT GCCCGTGCAA CATCCCGTCG GCCGACGTGA CCGGTCCGCT GAAGTCCTTC
TACGACAACT ACAAGAAGGC CACCAACGCC GACCCGGCCA TCTACGCGAC CGAGGGCTAC
GACGCCGCGA CCGCGTACAT CAAGGCGATC GAGGCGGGCA ACACCACCTC GGAGAAGATC
AACGACTTCC TGAAGACCGC GGACTTCGAG GGCGTCTCCA AGCCGATCAA GTTCAAGGCG
AACGGCGAGC CCGAGAACAA CGCCATCTTC ATCTACCAGG TCAAGGGTGG CGTGCTGAAG
CTGCTGGGCG CGGCCGACGA GGCCAAGCTC GAGGGCTGA
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| Protein sequence | MSGARLGRVL ALAAASSLVL AACAGGGGGS STGSGDGSTV KIGFMGDLTG ENSAIVIPPR
NGAKLAFDEY NAKNPKVKIE LVEYDSQGKP EQATSLITKA VGSDKISALI GPAFSGESKA
IGGVLDQNKI PSISPSATNP GLAANGWSFW HRVVANDDDQ GPGIADFLVK AKSPKKAFVL
SDDQEYSTGL ADAVAKAFEG AGVAVEKDRF SKDASDYSSV VTKVASANPD VIVYGGYYAQ
AGRLLKQLRD SNVTAPFASG DGSLDAQLVS AAGAQAAEGA ILACPCNIPS ADVTGPLKSF
YDNYKKATNA DPAIYATEGY DAATAYIKAI EAGNTTSEKI NDFLKTADFE GVSKPIKFKA
NGEPENNAIF IYQVKGGVLK LLGAADEAKL EG
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