Gene Amir_5533 details

Gene Information

• Locus tag: Amir_5533
• ID: 8329739
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 6571672
• End bp: 6572082
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 644945973
• Product: thioesterase superfamily protein
• Protein accession: YP_003103197
• Protein GI: 256379537
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism
• TIGRFAM ID: [TIGR00369] uncharacterized domain 1

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGACCC CCGACCAGCT CCCCGGCCTG AACCAGGCGT TCGCCGACGA GCAGCTCATG 
ACCCGGATGG GCATCGAGAT CACCCGGTGG GACGGGGACG AGATGGTCGG CACGATGCCC 
GTCAAGGGCA ACCGCCAGCC GTACGGGCTG CTGCACGGTG GCGCGAACGC GGTGCTCGCG 
GAGACGCTGG GCTCGATCGC GGCGGCGACC CACGCGGCCC CCGACCGGGT GGCGGTCGGG 
CTGGAGCTGT CCTGCACGCA CCACCGGTCC GCGCGCGAGG GCCTGGTGAC GGGCGTGTGC 
AAGCCGGTGC ACCGGGGCCG CAGCACGGCG ACCTACGAGA TCGTGGTCAG CGACGAGGAC 
GGCAAGCGGC TGTGCACGGC GCGGCTGACC TGCTTCCTCA AGGAGGTCTG A 

 

Protein sequence

MTTPDQLPGL NQAFADEQLM TRMGIEITRW DGDEMVGTMP VKGNRQPYGL LHGGANAVLA 
ETLGSIAAAT HAAPDRVAVG LELSCTHHRS AREGLVTGVC KPVHRGRSTA TYEIVVSDED 
GKRLCTARLT CFLKEV