| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5421 |
|---|
| Symbol | |
|---|
| ID | 8329623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 6440358 |
|---|
| End bp | 6441242 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644945858 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003103086 |
|---|
| Protein GI | 256379426 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGA TGCTCGAGGT GGCCGCGCTG GGCCACACCT ACCAGGGCAA GGACGGCGCC
CACACGGCGA TCGACGACCT CTCCTTCACC GTCGGCGCCG GTGAGCTGGT CTGCGTCGTC
GGCCCCTCCG GGTGCGGCAA GTCCACGCTG CTCCGGACGA TCTCCGGGCT GGTGCGCCCC
AGCCGGGGCG CGGTGAGCCT GCACGGCAAC GCGGTCAAGG GCGTGCCCGA CGACCTGGCC
GTGGTGTTCC AGGACTACAG CCGCTCGCTG TTCCCGTGGC TGAGCGTGCA GAAGAACGTG
GAGTTCCCGC TGCGCAGCTC GGTCGGGCGG GCGAAGCGGC GGGCGCGCGC GGCCGAGGCG
CTGGAGTGGG TCGGGCTGGC GGCGGCGGGG CGCAAGTACC CGTGGCAGCT GTCCGGCGGG
ATGCAGCAGC GGGTGGCGAT CGCGAGGGCG CTGGCGTACC GGCCTGCCCT GCTGCTCATG
GACGAGCCGT TCGCGTCGGT GGACGCGCAG ACCAGGTTCG AGCTGGAGGA CCTGCTGCTG
AAGATCCGCA CCGAGCACGA CACGACGGTG CTGGTGGTCA CGCACGACAT CGACGAGAGC
GTGTACCTGG GCGACCGCGT GCTGGTGCTG TCGACCTCGC CCGCGTCGGT CGTGGCGGAC
CTGCGGGTGG ACCTGCCCGC GCCGCGCGAC CAGATCACCA CGCGCGAGTC GGACGTGTTC
GTGGGGCTGC GGGCGGAGGT GGCGCGGCTG CTGAACGTGG GCAAGCCCTC GCCCGCCCGG
CGCCCGGCGC CCGGTCGGCG GGCCGCTGAC GGGCAGGCCG CGAGATGGGC GGCGGAGGAG
CGCGCCGAGG TGGAGAGGGG CGCCGCGCAG CGCTTGGCGC GCTGA
|
|---|
| Protein sequence | MTAMLEVAAL GHTYQGKDGA HTAIDDLSFT VGAGELVCVV GPSGCGKSTL LRTISGLVRP
SRGAVSLHGN AVKGVPDDLA VVFQDYSRSL FPWLSVQKNV EFPLRSSVGR AKRRARAAEA
LEWVGLAAAG RKYPWQLSGG MQQRVAIARA LAYRPALLLM DEPFASVDAQ TRFELEDLLL
KIRTEHDTTV LVVTHDIDES VYLGDRVLVL STSPASVVAD LRVDLPAPRD QITTRESDVF
VGLRAEVARL LNVGKPSPAR RPAPGRRAAD GQAARWAAEE RAEVERGAAQ RLAR
|
|---|
| |