Gene Amir_5374 details

Gene Information

• Locus tag: Amir_5374
• ID: 8329576
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 6386659
• End bp: 6387315
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 80%
• IMG OID: 644945811
• Product: histidine kinase
• Protein accession: YP_003103039
• Protein GI: 256379379
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG4585] Signal transduction histidine kinase

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCCGCC AGTTCGTCGT GTCCGGGGAC GCCGCCGCCG AGGCGCGGCG CCGGGTGCTG 
CGCGAGCTGC ACGACGGGGT CGGGCCCTCG CTGGCCGCGA TCGCGTTGGG CCTGCGCGCG 
GCGCGCGAGC TGCTGCCGCG CGACGCCGCC GCGGCGGGCA GGTTGCTGGT GGCGCTGGAG 
GAGGAGGCGC ACGGCGCGGT CGCCGAGGTG CGCAGGCTCG CCGCCGACGC GCAGCACCCG 
CCGGTGCTGG CGCGGCTGGG GCTGGTGGGG GCGGTGCGGG CGCACGCGGG GGCGCTGGCC 
GGGCGGCACC CGGTGGTGGT GGAGGTGGAG GTCGTCGGGG AGCTGCCCGA GCTGGGGGCG 
GACGTCGAGG TCGCCGCCTA CCGGATCGTG TGCGAGGCGC TGACGAACGT GGTGCGGCAC 
GCGGGCGCCC GGCGCTGCGC GGTGTGGCTG CGGTTCACCG ACCGGCTGCG GGTCGAGGTC 
GTGGACGACG GGGTCGGCCT GCCGCGCGAG GCGGGAGCAG CGGGCGAGGT GGCGCCTGCG 
GGCGTGGGGC TGCGGTCGAT GCGGGAGCGG GCGCGCGAGG TGGGCGGCAC GTGGGCCGCC 
GAGGTCCCCG AGCGGGGTGG CACGCGCATC GCGGTCGAGC TGCCCGTGGG CGGGTGA 

 

Protein sequence

MRRQFVVSGD AAAEARRRVL RELHDGVGPS LAAIALGLRA ARELLPRDAA AAGRLLVALE 
EEAHGAVAEV RRLAADAQHP PVLARLGLVG AVRAHAGALA GRHPVVVEVE VVGELPELGA 
DVEVAAYRIV CEALTNVVRH AGARRCAVWL RFTDRLRVEV VDDGVGLPRE AGAAGEVAPA 
GVGLRSMRER AREVGGTWAA EVPERGGTRI AVELPVGG