Gene Amir_5333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5333 
Symbol 
ID8329535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp6344234 
End bp6344854 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content72% 
IMG OID644945771 
Productprotein of unknown function DUF305 
Protein accessionYP_003102999 
Protein GI256379339 
COG category[S] Function unknown 
COG ID[COG3544] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.628713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCACA CCAAGAACAG GCGCGCCACC GGCGTCGTCG CGCTGCTCGC GGGCGCCCTG 
CTGCTGTCCG CCTGCGGGTC GGGCGGCGAT CCCGGCCCCG CGCCCGCCGC CGCCACCGAC 
GCCGCGAGCC GGTCCGCCTC CGGGCAGAGC GCGGGCGGCG ACCACAACGC CAGCGACGTC 
ATGTACCTCC AGATGGCGAT CGAGCACCAC CGCCAGGGCC AGGACCTCGT GGAGCTGGCC 
GAGACCCGCG CCACCCGCGA GGAGGTCAAG ACCCTCGCCT CGGCCATCGC GGTCACCCAG 
AAGTCCGAAG TGGACAGCAT GGTGGGGTGG CTCGAGGAGT GGGGCGAGCC GGAGTCCGCC 
GGGACCGACC CGCAGCTGCA CGCCGACCAC GGCGGCGACC ACTCCACCAG CCCCGAGCTG 
ATCGCCGAGG TCGCGGGCAA GAGCGGCGCC GAGTTCGAGA CGGCCTTCCT GAACCTGCTC 
ATCGCGCACC AGCACAACGC GGTCGACCTC ACCAAGGTCG TGCGGGAGCA CGGCGCGAAC 
CAGCAGACCA AGGAGCTGGC CGAGCGCGTG TTCCAGTCCC GGACCGCGCA GATCACCCAG 
ATGCTCAAGT ACCTGAGCTG A
 
Protein sequence
MSHTKNRRAT GVVALLAGAL LLSACGSGGD PGPAPAAATD AASRSASGQS AGGDHNASDV 
MYLQMAIEHH RQGQDLVELA ETRATREEVK TLASAIAVTQ KSEVDSMVGW LEEWGEPESA 
GTDPQLHADH GGDHSTSPEL IAEVAGKSGA EFETAFLNLL IAHQHNAVDL TKVVREHGAN 
QQTKELAERV FQSRTAQITQ MLKYLS