| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5223 |
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| Symbol | |
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| ID | 8329425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6219516 |
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| End bp | 6220952 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644945662 |
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| Product | Fmu (Sun) domain protein |
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| Protein accession | YP_003102890 |
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| Protein GI | 256379230 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.103828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGCA GCACCTCGTC CCCCCGGTCG TCCCGGCCCT CCCGGCCGCG CCGCCCGCAC
CCGCCCAAGC GCAACCCCGG CCCCGAGCGC CCGCCGCAGG AGGACCCGGC CCGCCGCGCC
GCGCTGGACA CCCTGCGCGC CGTCACCAAG CGCGACGCCT ACGCCAACCT GGTGCTGCCC
GGCCTGCTGC GCGAGCGCCG CATCACCGGC CGCGACGCCG CCCTCGCCAC CGAGCTGACC
TACGGCACGG CCCGCGCGCG GGGCCTGCTC GACGCGGTCC TCGCGGCCTG CTCGGACCGC
CCGCTCGCCG AGATCGACGA CGCCGTCCTG GACGCCCTGC GCCTGGGCGC CTACCAGCTG
CTGCGCACCC GCGTGCCCGC GCACGCCGCC GTGGCCTCCA CGGTCGACCT GGTGCGCGCC
GACCGGGGTT CGGGCGCGGC GGGCTTCGCG AACGCCGTGC TGCGCCGGGT CACCGGCCAG
GACGAGGCGG GCTGGATCGA CGAGGTCGCC CCCGACGAGG AGAGCGACCC GATCGGCTAC
CTGGCCATGT CGACCGCGCA CCCGCGCTGG GTCGCGCAGG CCTTCGCCGA GGCGCTGGGC
AGCCGGGGCG AGCCGCTGCG CGCCGCGCTG GCCGCCGACG ACACCCGCCC GATCGTGCAC
CTGATCGCCC GACCGGGCGA GATCAGCGCG GACGAGCTGG CCGCCATCAC CGGCGGCGAC
CTCGCCCCGT ACTCGCCGTA CGGCGTGCAC CTGGCCGACG GCGGCGACCC GGCCGACCTG
GACGTGGTGC GCGAGCGCCT GGCCGCCGTC CAGGACGAGG GCAGCCAGCT GTGCGCGCTC
GCGCTCACCA GGGCCCCGCT GGAGGGGACG GACGAGCGCT GGCTCGACCT GTGCGCCGGT
CCCGGCGGCA AGGCCGCGCT GCTCGGCGCG CTGGCCGCGC TGTCGGACGC GACCCTGGAC
GCGGTCGAGA AGACCCCGCA CCGCGCCGAG CTGATCCGCA AGGCCACCAT CGGCCTCCCG
GTGGACGTGC GCGTCGCGGA CGGCCGCGAC CCCGGCCTCG ACGGCGGCTA CGACCGCGTC
CTGGTCGACG CCCCCTGCAC GGGCCTCGGC GCGCTGCGCC GCCGCCCGGA GGCCCGGTGG
CGCCGCCAGC CGTCCGACGT GGCGGCCCTG GCCAAGCTCC AGCGCGAGCT GCTCACCTCC
GCGCTCGACC TGGTGCGGCC CGGTGGCCTG GTGGCGTACG TGGTGTGCTC GCCGCACCTG
GCCGAGACGG TCGGCGTGGT CGCCGAGGTG GCCCGCAAGA CCGGGGCCGA GCGCCTGGAC
ACCAGGGAGT TCTTCCCCGG CGTGCCGAAC CTCGGCGACG GCCCGCAGGT GCAGCTGTGG
CCGCACGAGC ACGGCACCGA CGCGATGTTC TGCGCGATCC TGCGCCGCCC GGCCTGA
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| Protein sequence | MNGSTSSPRS SRPSRPRRPH PPKRNPGPER PPQEDPARRA ALDTLRAVTK RDAYANLVLP
GLLRERRITG RDAALATELT YGTARARGLL DAVLAACSDR PLAEIDDAVL DALRLGAYQL
LRTRVPAHAA VASTVDLVRA DRGSGAAGFA NAVLRRVTGQ DEAGWIDEVA PDEESDPIGY
LAMSTAHPRW VAQAFAEALG SRGEPLRAAL AADDTRPIVH LIARPGEISA DELAAITGGD
LAPYSPYGVH LADGGDPADL DVVRERLAAV QDEGSQLCAL ALTRAPLEGT DERWLDLCAG
PGGKAALLGA LAALSDATLD AVEKTPHRAE LIRKATIGLP VDVRVADGRD PGLDGGYDRV
LVDAPCTGLG ALRRRPEARW RRQPSDVAAL AKLQRELLTS ALDLVRPGGL VAYVVCSPHL
AETVGVVAEV ARKTGAERLD TREFFPGVPN LGDGPQVQLW PHEHGTDAMF CAILRRPA
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