Gene Amir_5221 details

Gene Information

• Locus tag: Amir_5221
• ID: 8329423
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 6216688
• End bp: 6218796
• Gene Length: 2109 bp
• Protein Length: 702 aa
• Translation table: 11
• GC content: 80%
• IMG OID: 644945660
• Product: hypothetical protein
• Protein accession: YP_003102888
• Protein GI: 256379228

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0375779
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTCGACG GCCCGCCCTG GTTCGGCAAG GCCCGCGTCC TGGAGGCCGC CGTCGGCGCG 
GCCCGCGACC GCGGCTACAC CCCGCTGCTC GCCAGGGCCC CCGGCGAGGT CGACCCGGCG 
GCCCTGCGCC GCGCGCCCCG CCCGCTGCTC GCCCTGAACG ACGCGCACGC CGACCCGCCC 
GCCCTGCTGC ACCTGCTGCC CGTGCTGCGC GAGCCGAACG TGACCGGCCT GCTCGCCATG 
ACCTCGTCCC TCGCGGGCGA CGAGGTCCGC CGCGGGCTGG CGGGCGCCGA CGTCCTCCCG 
CTCGGCCCGG TCGACCCGGC CGCCGTGGAG CGGGCGCTGC GCGAGCTGCT CGAACTCCCG 
CCGCACCCCG ACTTCACCGC GCTGGCCGCC ACCGCGGGCG GCAACCCGAG GATGCTCGCC 
GAGCTGGTCG CGGGCCTGCG CGAGGAGGAC CGCGTCGAGG TCCACGACGG CACGGCCCGG 
CCGGTGGAGG GCCCGCTGCC GCGCCGCGTC CGCGGCCTGA TCGGCTCCAG GGTCGACGCG 
CTGCCGCCCG ACGCGGCCAG GCTCCTGCGC GGCGCCTCCG CCCTCGGCGC GGGCTTCCGG 
CCGCACGACG CCGCCGCCGT CGCGGGCACC GGGGCCACCC CGGAGGCGGT GCGCGCGCTG 
ATCGCCTCCG GCATCGTGCT GGAGCGGGGC GAGCGCCTGG AGTTCTGCTC GGAGCTGGTG 
CGCCGCGCCG TCGCCGAGGC CGTGCCCGCG CCCGCGCCGT GCCCACCGCC CGCCGCGCCG 
CACAGCGACA CCGACCGGGC CCTGCTGCAC CGCGTCCGCG CGCTGTCCGA GGACGGCCGC 
CTCGCCGAGG CCACCGGGCT GGCCACCTCG GGCCTGACCG GCGCGGCCCC GGACGTGACC 
GCCCTGCTGC ACGTCGAGCT GGCCGGGATC AGGTTCGCCG AGGGCGACGC GGTGGGCGCC 
GACCTCCAGG CGGCCAAGGC GTGCTCCACC CGTGGAGCCG AGCCGGGCAC CCGCGCGCTC 
GCCGAGGCGC TGCGGCTGCT CGCCAACTAC TTCACCGAGG GGCCGCTGGC GGGCGCGCTG 
GCGCTGTCGG TGCTGTCCGC GCGGGGCCAG CAGACCGGCG ACCCGGACGT GGTGATGGCC 
GCGTCGGTCC GCTCCTGCCT GGAGTGGTCG GCGGGCAACC TCGCGGAGAG CCTGTACTGG 
GGGCGCGAGG CCACCCGCTG GGAGCCGGGC GGGCCCACCA CGTGGTGGCA GAGCTACTGC 
AACGGGGCGT TCGCGCTCAA GCTGTCCGCG CTCGGCGAGT TCGCGCAGGC CGAGCGGCTG 
GTCCGGCCGG ACGACCCGGC GCAGCCCTGG GAGACCCCGC CCGGCGCGCG GGCGCTGCGG 
CTGTTCGCGC GTGCTCGGGT GCAGCTCCAG TCGGGCAGGC TCGTGCAGGC GCAGGTGACC 
GGCACGGCGA GCCTCGCGCT GGCCAGGGGC GGCGGCATCG AGCTGCTGAT CCCGCTGCTC 
GGCGCGGTGC TGTCCACGGC GGCGCTGCTG CGCGGCGACC TGGCCGCCGC CGCCGAGCAC 
GGCCGCCGCT GCCTGGAGGG CCCGTTCGCC CGCCGCCTCG CCGAGCTGAT CGGCCAGCCC 
GACTGGGTGC TGCTCCGGCT CGCCGAGGCC CAGGACGGGC CCGCTCGGGC GGCCGAGCTG 
GCGCGCGGGT GCGCGGCCAG GCCGGGCGCG CTGCGCCGGG TGCTGATGGA GGAGTCCACG 
GCCGCGCCGT GGCTGGTCCG GGTGGCGCTG GCGGTGGGGG ACGCGGGGCT GGCCGACCTC 
GTGGTCGACG CGGCGGCGGA CCTGGCGGCG GCCAACCCCG GCACCGGCGT GCCCGCCGCG 
TCCGCCGCGC ACGCCCGCGC CCTGCGCGAC CACGACCCGG CGGCCCTGCG CACCGCGACC 
ACCGCCCACC GCCACCCGCT GACCAGGGCC CTGGCCTGCG AGGACCTGGC CGAGCTGCTC 
GCCGGGCGCG GCGACGCGGC CGGGGCGGCG GAGCAGGCCG AGCGGGCGCT GCGCGGCTAC 
GAGCGCATGG GCGCGGAGCG CGAGGCGGCC CGGCTGCGCG CGCGGACCAC GGGCGCCCAG 
CCGGTGTGA 

 

Protein sequence

MLDGPPWFGK ARVLEAAVGA ARDRGYTPLL ARAPGEVDPA ALRRAPRPLL ALNDAHADPP 
ALLHLLPVLR EPNVTGLLAM TSSLAGDEVR RGLAGADVLP LGPVDPAAVE RALRELLELP 
PHPDFTALAA TAGGNPRMLA ELVAGLREED RVEVHDGTAR PVEGPLPRRV RGLIGSRVDA 
LPPDAARLLR GASALGAGFR PHDAAAVAGT GATPEAVRAL IASGIVLERG ERLEFCSELV 
RRAVAEAVPA PAPCPPPAAP HSDTDRALLH RVRALSEDGR LAEATGLATS GLTGAAPDVT 
ALLHVELAGI RFAEGDAVGA DLQAAKACST RGAEPGTRAL AEALRLLANY FTEGPLAGAL 
ALSVLSARGQ QTGDPDVVMA ASVRSCLEWS AGNLAESLYW GREATRWEPG GPTTWWQSYC 
NGAFALKLSA LGEFAQAERL VRPDDPAQPW ETPPGARALR LFARARVQLQ SGRLVQAQVT 
GTASLALARG GGIELLIPLL GAVLSTAALL RGDLAAAAEH GRRCLEGPFA RRLAELIGQP 
DWVLLRLAEA QDGPARAAEL ARGCAARPGA LRRVLMEEST AAPWLVRVAL AVGDAGLADL 
VVDAAADLAA ANPGTGVPAA SAAHARALRD HDPAALRTAT TAHRHPLTRA LACEDLAELL 
AGRGDAAGAA EQAERALRGY ERMGAEREAA RLRARTTGAQ PV