Gene Amir_5208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5208 
Symbol 
ID8329410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp6204629 
End bp6205039 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content76% 
IMG OID644945647 
ProductRieske (2Fe-2S) domain protein 
Protein accessionYP_003102875 
Protein GI256379215 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.859194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATCGGC GAACCCTCCT GTGCGGCCTG CTCGCGCTCA CCACCCCCGT CGTCGCGACC 
GCCTGCGGCC CCGGCGCGCC GACCCGCCGT CCCGGCGTGG GCAGCGGCAA GCCCGGTGAT 
CGGATCGCGG CGCTGGCCGA CGTGCCCGTG GGCGGTGGCG CGCTGGTCGA CGTGTCCACC 
GACGGGCAAC TCCTGCTGCT CCGCCCCGCC GAGACCGAGC TGCGGGCCTT CAACCCGGCC 
TGCCCGCACG CCGGAGCCAC CGTGAACCCG CCCACCGGGG GCTCGGTCGC GTGCCTGGCG 
CACGGCAGCA CGTTCGACCC CGCCACCGGC GAGGTGCGGT CCGGCCCGGC GAAGCAGGAC 
CTCACCGAGG TCCCCGTAAG GGTGATGGAC CAGGACGTTC TGCTCGCCTG A
 
Protein sequence
MDRRTLLCGL LALTTPVVAT ACGPGAPTRR PGVGSGKPGD RIAALADVPV GGGALVDVST 
DGQLLLLRPA ETELRAFNPA CPHAGATVNP PTGGSVACLA HGSTFDPATG EVRSGPAKQD 
LTEVPVRVMD QDVLLA