| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5089 |
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| Symbol | |
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| ID | 8329287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6061834 |
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| End bp | 6065136 |
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| Gene Length | 3303 bp |
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| Protein Length | 1100 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644945525 |
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| Product | AAA ATPase |
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| Protein accession | YP_003102757 |
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| Protein GI | 256379097 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0433] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0231758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGCTCG TCGGACCGGG CCTGGACGAC GAGCGGCGCA ACGCCCTGCA GGCCGTGCAC
TTCAACTCGG CGGTCGCGCC CGACGACATC TGGAGCCCGC TGGCGCACCA CGTGCCCGAG
CTGCACGGGC CGGTCGCCGC GGAGCTGGCG CGGGCCGTGG CGTCCGCCGC GCGCAAGCCG
CGCTCCACGC CGATCGGGGT GGTGCTGCGC GGGGAGCGCG GGGTCGGGAA GACGCACCTG
CTGGGCTGGT TGCGGCAGGA GGCGCGGGCG CGCGGCGGGT GGTTCTTCCT GCTCAAGCTG
CTGGACGACA GGTCGTTCTG GGCGGGCGCG GTGCACGGGG CGATCAGCGG GCTCAACCGC
GAGGGCGACC AGCTCGGCGC GATGCTGGAC GCGCTGGCCA AGGCGACCGG GCACACCGAC
GAGTCGCGGT TGCGGCTGCG CGGCACGATC CCGATCAGCC GGGAGTACCT GGACGAGCTG
GTGGAGCGGG TGCGCGAGCT GGACCCGCAG GTGGCGCTGG AGTGCCAGGA CACGCTGCGG
GCGCTGGTGC TGTACCGGGC GCGGGGGCGG CCGAGCGAGG TCGGGCACCG GTTCCTGGCG
CTGGAGGACG GCGGCATCGA CGAGGCGGAC CGGGCGGAGT GGGGCTTCCA CCTGCGGTCG
CGGTCCGCGC AGCTGGTGCT GGGGGACCTG TCGCGGATCT TCGCGCTGAC CGGGCCGGTG
GTGATGGCGG TCGACCAGAT CGACTCGGTG ATCACCCAGC AGCCCGGCTC GTCGGGGCTG
GTGGACCGGC TCGCGGACGG GCTGATGCGG CTGCGCGAGG AGACCCGGCG GACGGTGCTG
GTCGTGGCGT GCCTGCCCCG GTCGTGGGAG CTGCTGTCGG AGCACGCGGT GAACTCGGCG
GCGAGCCGGT TCGCGGTGCT GGACCTGCGC ACCGCGATGC CGAGCGCGGG CGTGGCGGAG
GCGATCGTGC AGCGGCACCT GGGGGCGCTG TACGCGGAGG AGGGGTTCGC GCCGCCGCAC
CCGACGTGGC CGGTGGCGCG GGTGGCGTTC GGCGGGGCGG AGGTGGCGCA CTCGACGCCG
AGGCGGTTGC TCCAGCGGGT CGAGGAGCAC GTGCGGTGGT GCCTGGCGCG CGACGTCGAG
GCGGAGCTGC GGGACTTCGC GGACGGCCCG GCGGAGGTGG CGGCCCCCGA GGTGGACGCG
GGCGGGTTGG CGGAGCTGGA CGAGCGGTTC GCCCGCGCGT GCGAGGCGGC GGACGTGACG
TCCCCGCTGG ACCCGGCGCG CGAGGACGAG CTGGTGCCGG GGCTGCTGTC GGCGGCGCTG
CGCTGCTACG CGGTGGAGCA CGGCGGCGAC CTCGTGCTCG ACCCGCCGCC GGGCCGCAAG
CCCGCGCTGC ACGCCCGGTT GCGGCTGACG CTGGACGAGG CCAGCGAGGA CGAGGTGTGG
TGGTCGTTCC GGGCGATCGC GCACGGCCAC AGCACGGCGG TGCTGGCGCG GCTGCGGTCG
GCGTGCCTGG AGGCGGGCGT GTTCGGCGGG ACCGGCAAGC GCCGCCTGGT GGTGCTGCGC
GGCACGCCGT TCTCGGGCGG CCCGCAGACG GCGCGGGCGG TGGGCGAGCT GGTCGCGGCG
GGCGGCGAGG TCCTGCCGCT GACGCCGGAG GACCTGCGGG TGTTCTCGGC GCTGCGCGAA
CTCGTCGGCC AGGCGCCCGC CGGGTTGCTG GCCTGGCTGG CCGCGCGCAC GCCCGCGAGC
CGGACCCCGC TGCTGCGCCG GGTGCTGCCG CCGGTGGGGG ACGCGGGCTC GCAAGCCCCG
CAGCGCCCGT CGGCCCACGA CGAGCCGGTG TGGCCGGAAC GCGAGTACGA GGAGCAGGTC
TGCGCACTGC CCGCACCACC ACCACAACAC GCCCCCGAAC CGTCCTGGCC CGAACGCGGC
TGGCCGGCGG CCGAGCCGTC CCGCCTGGCG GGAAGCCTGT TCGACCCGGA ATCCCGCTGG
CCCGCCACCC CCGCCCCTGT CCCCACCCCC ACCCTGATCC CGGCCCCGGC CCCGGCCCCC
GCCCCGGCCC CGGTGGTCGC ACCCACCTCA CCGCCCTCCG CCGACGCCAC GATCACCCTG
GGCGCGGACG CGACGACCGG TCGCCCGTTC ACCCTCCCCC TCGTTCTGCT GCGCAAGCAC
GTGGCCGTGT TCGCGGGCAC CGGTTCCGGG AAGACCGTGC TGCTGCGCCG CCTGGTGGAG
GAGGCCGCGC TGCACGGCGT GTCCTCGGTC CTCCTGGACA CCAACAACGA CCTGGCCCGC
CTAGGCGACG CCTGGCCGTC CCCGCCCGAG GGCTGGGCCC CCGGTGACGC CGACCGCGCC
CGCCGCTACC TCGACGGCAC GGACGTCGTG GTGTGGACGC CGGGCCGCGA GTCCGGAAGG
CCGCTGGTGC TGGACCCGCT GCCGGACTTC GGCGCGGTGC GGGGCGATCC GGACGAGTTC
CGGGGCGCGG TCGACGCGGC CGTGGCGGGC CTGCTGCCCA AGCTCGCCCT GTCCGGTCGC
AGGCTGGTGC ACGGCAGGGC GGTGCTGACC GAGGCCCTGA CCGCGTTCGC CGGTCGCGGC
GGGCGCGACG TGGCGGACTT CGTGGCGTTC CTGCACGACC TGCCGGAGGG CGCGAGCACG
ATGCGCGACG CCACCCGCCT GGCCCCCGAG CTGGCCGACG GCCTGCACGC CGCGATCATC
ACCGACCCGC TGTTCGGCGG CTCGGGCCGC CGCCTGGACC CCGGCGAGCT GCTGCGACCG
GCTCCGGGCA CGCGGGCGCG GGTGTCGGTG ATCAGCTGCG TGGGGCTGCC GACGGACGGC
CAGCGCCAGG CGTTCGCGCA CCAGCTGCAG CAGGCCCTGT TCGCGTGGGT GCGCCGCAAC
CCAGCCGGTG ACCGCCCGCT GGGCGGCCTG CTGGTCCTCG ACGAGGCCCA GACCTTCGCG
CCGTCGCGCG GCGAGGTGGT GTCGAGCGCG AGCACCCGGC TGCTGGCGGC GCAGGCCAGG
AAGTACGGCC TGGGCGTGGT CTTCGCGACC CAGGCCCCGA AGGGCCTGCA CAACTCGGTC
ACCGGCAACA CCGCGACCCA GTTCTTCGGC AGGCTGAACG CCTCCGCGCA GGTGCAGACG
GCCGTCGAAC TGGCAGCGGC CCGCGGCGGC CGGGTGGACG ACGTGTCAAG GCTGGGCGCG
GGCCGCTTCT ACGGCGCGAC GGAGGGCACC GGCTTCACGA AGCTGCGCCT GCCGATGTGC
CTGAGCCACC ACCCGCAAGG CGCGCTGACC GAGGGCGAGG TGCTGGCGAG GGCACGCGCC
TGA
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| Protein sequence | MTLVGPGLDD ERRNALQAVH FNSAVAPDDI WSPLAHHVPE LHGPVAAELA RAVASAARKP
RSTPIGVVLR GERGVGKTHL LGWLRQEARA RGGWFFLLKL LDDRSFWAGA VHGAISGLNR
EGDQLGAMLD ALAKATGHTD ESRLRLRGTI PISREYLDEL VERVRELDPQ VALECQDTLR
ALVLYRARGR PSEVGHRFLA LEDGGIDEAD RAEWGFHLRS RSAQLVLGDL SRIFALTGPV
VMAVDQIDSV ITQQPGSSGL VDRLADGLMR LREETRRTVL VVACLPRSWE LLSEHAVNSA
ASRFAVLDLR TAMPSAGVAE AIVQRHLGAL YAEEGFAPPH PTWPVARVAF GGAEVAHSTP
RRLLQRVEEH VRWCLARDVE AELRDFADGP AEVAAPEVDA GGLAELDERF ARACEAADVT
SPLDPAREDE LVPGLLSAAL RCYAVEHGGD LVLDPPPGRK PALHARLRLT LDEASEDEVW
WSFRAIAHGH STAVLARLRS ACLEAGVFGG TGKRRLVVLR GTPFSGGPQT ARAVGELVAA
GGEVLPLTPE DLRVFSALRE LVGQAPAGLL AWLAARTPAS RTPLLRRVLP PVGDAGSQAP
QRPSAHDEPV WPEREYEEQV CALPAPPPQH APEPSWPERG WPAAEPSRLA GSLFDPESRW
PATPAPVPTP TLIPAPAPAP APAPVVAPTS PPSADATITL GADATTGRPF TLPLVLLRKH
VAVFAGTGSG KTVLLRRLVE EAALHGVSSV LLDTNNDLAR LGDAWPSPPE GWAPGDADRA
RRYLDGTDVV VWTPGRESGR PLVLDPLPDF GAVRGDPDEF RGAVDAAVAG LLPKLALSGR
RLVHGRAVLT EALTAFAGRG GRDVADFVAF LHDLPEGAST MRDATRLAPE LADGLHAAII
TDPLFGGSGR RLDPGELLRP APGTRARVSV ISCVGLPTDG QRQAFAHQLQ QALFAWVRRN
PAGDRPLGGL LVLDEAQTFA PSRGEVVSSA STRLLAAQAR KYGLGVVFAT QAPKGLHNSV
TGNTATQFFG RLNASAQVQT AVELAAARGG RVDDVSRLGA GRFYGATEGT GFTKLRLPMC
LSHHPQGALT EGEVLARARA
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