| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5047 |
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| Symbol | |
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| ID | 8329245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6004530 |
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| End bp | 6005375 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644945483 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003102715 |
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| Protein GI | 256379055 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.243534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGCA CCTGGTTCAT CACCGGCACG TCCTCCGGCT TCGGCCGCGA GCTGACCGCG
CTGCTCCTGG CGCGCGGCGA GCGGGTCGCC GCCACCGCGC GCCGACCGGA GACCCTGGAC
GACCTGGCCG CCGAGCACGG CGACCGGCTC TGGCGCGCCG CGCTCGACGT CACCGACACC
GCCCGCCAGC GCGAGGTCGT GGACCGCGCG TTCGCCGAGC TGGGCCGGAT CGACGTCGTC
GTGTCCAACG CGGGCTACGG CCTGTTCGGG GCGGCCGAGG AGCTGTCCGA CGAGCAGATC
GACCGGCAGG TCGCCACGAA CCTCACCGCG TCCGTCCAGC TCGCCCGCGC GGTCGTGCCG
CACCTGCGCC GCCAGGGCGG CGGCCGGATC TTCCAGATCG CCAGCGTCGG CGGCCAGATC
GCCTTCCCCG CCATGAGCCT CTACCACGCC ACCAAGTGGG GCGTCGAGGG CTTCTGGGAG
TCCACCGCGC CGGAACTGGC GCCGTTCGGC ATCGGCGTGA CGATCGTCGA GCCCGGCATG
GCCCGCACCA ACTTCGGCGG TGGCGGCGCG GTCTTCGGCG CGCCGCTGCC CGAGTACGCC
GACGGCCCCT CCGGGCAGCT GCGCCGCGTC GTCGCCGGCG AGCTTCCGCC CCTGCCCACG
CCCGGCGACC CGGCCAAGGT CGCCGCCGCG ATCGTCGACT CCGCCGACCG CGCCGACGCA
CCGCTGCGCC TGACGCTGGG CTCGGACGCC CACGCCCTCG CCACCGCCGC CCTGCGCGAC
CGCCTCGCGG CGCTGGAGGC GGGCCGCGAG CTGGCCTTCT CCACCGACGC CGACGACGTC
CGCTGA
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| Protein sequence | MTRTWFITGT SSGFGRELTA LLLARGERVA ATARRPETLD DLAAEHGDRL WRAALDVTDT
ARQREVVDRA FAELGRIDVV VSNAGYGLFG AAEELSDEQI DRQVATNLTA SVQLARAVVP
HLRRQGGGRI FQIASVGGQI AFPAMSLYHA TKWGVEGFWE STAPELAPFG IGVTIVEPGM
ARTNFGGGGA VFGAPLPEYA DGPSGQLRRV VAGELPPLPT PGDPAKVAAA IVDSADRADA
PLRLTLGSDA HALATAALRD RLAALEAGRE LAFSTDADDV R
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